Basic Structure of Nucleic Acids
Acid
Monophosphate Diphosphate Triphosphate
5 4
Base
1 Adenine
Sugar
3
Guanine Purine Thymine Cytosine Pyrimidine 2 Uracil
Ribose, Deoxyribose
Nucleoside (Adenosine)
Nucleotide (Adenosine monophosphate, AMP)
Nucleotides Linked by Phosphodiester Bond
5
PO4
2-
1
3
O O-P=O O OH PO4
2-
2
3 OH
Phosphodiester bond
5 P 1 R P 2 R P 3 R P 4 R P 5 R P 6 R 3
A kind of phospho-polysaccharides
The Notation for Nucleic Acids
A T C G A T C G
5
P OH
R
P 5
1 2 3
pApTpCpGpApTpCpG-OH 3
5 pATCGATCG-OH 3
ATCGATCG
The Two Chains of DNA Are Antiparallel
5
5
pApTpCpGpApTpCpG-OH 3
5 5
pCpGpApTpCpGpApT-OH 3
3
Characteristics of Double Helix
5
1
2
36
3
4 5
Small groove
Large groove
7
8 9
10
1 Twist = 10.5 bp