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Endomembrane System in Cell Biology

The document discusses cell and molecular biology, focusing on the endomembrane system, which includes the nuclear envelope, endoplasmic reticulum, Golgi apparatus, lysosomes, and vacuoles. It details the structure and functions of the nuclear envelope, nuclear pore complex, and endoplasmic reticulum, highlighting their roles in protein synthesis, lipid metabolism, detoxification, and calcium ion storage. Additionally, it explains the cooperation between the liver and kidneys in drug metabolism and excretion.

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Beverly Estoque
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0% found this document useful (0 votes)
8 views20 pages

Endomembrane System in Cell Biology

The document discusses cell and molecular biology, focusing on the endomembrane system, which includes the nuclear envelope, endoplasmic reticulum, Golgi apparatus, lysosomes, and vacuoles. It details the structure and functions of the nuclear envelope, nuclear pore complex, and endoplasmic reticulum, highlighting their roles in protein synthesis, lipid metabolism, detoxification, and calcium ion storage. Additionally, it explains the cooperation between the liver and kidneys in drug metabolism and excretion.

Uploaded by

Beverly Estoque
Copyright
© All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as DOCX, PDF, TXT or read online on Scribd

SESE 117: CELL AND MOLECULAR

BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

THE ENDOMEMBRANE SYSTEM

Endomembrane System

 The endomembrane system is a network


of membranes within eukaryotic cells
that work together to modify, package,
and transport lipids and proteins.
 It plays a vital role in cellular processes
such as synthesis, modification,
transport, and degradation of cellular
materials.

Components of the Endomembrane System

A. Nuclear envelope

B. Endoplasmic reticulum

C. Golgi apparatus

D. Lysosomes

E. Various kinds of vacuoles

F. Plasma membrane (not physically part of the system but closely related)

NUCLEAR ENVELOPE

 The nuclear envelope is a double membrane that


encloses the nucleus, separating its contents
from the cytoplasm.
 It plays a crucial role in protecting the cell’s
genetic material and regulating molecular
traffic.

Structure:

Composed of two membranes:

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

Outer membrane – continuous with the endoplasmic reticulum (ER) and may have ribosomes on its
surface.

Inner membrane – lines the nuclear lamina for structural support.

 The two membranes are separated by a perinuclear space of about 20-40 nm.
 The envelope is perforated by nuclear pores, which regulate molecular exchange between
the nucleus and cytoplasm.

NUCLEAR PORE AND NUCLEAR PORE COMPLEX

 Nuclear pores are large protein structures that control the movement of proteins, RNAs, and
macromolecules.
 Each pore is surrounded by an intricate pore complex that maintains regulated exchange.
 The Nuclear Pore Complex (NPC) is composed of various protein structures:
 Nucleoporins (Nups): Proteins that form the NPC and regulate transport.
 Cytoplasmic filaments: Extend into the cytoplasm for cargo recognition.
 Central Transport Channel: Main passage for molecules moving between the nucleus and
cytoplasm.
 Nuclear Basket: Filament-like structures that assist in RNA and protein transport.
 FG-Nucleoporins: Contain phenylalanine-glycine (FG) repeats, forming a selective barrier
for transport.

NUCLEAR LAMINA

 The nuclear lamina is a dense netlike array of protein filaments that supports the shape of
the nucleus.
 Composed of lamina A, B, and C, which provide structural integrity and anchor chromatin.

NUCLEAR MATRIX

 The nuclear matrix is a framework of fibers extending throughout the nuclear interior,
providing additional support and organization.

NUCLEAR ENVELOPE

 Consists of the outer nuclear membrane (ONM) and inner nuclear membrane (INM).
 The ONM is continuous with the endoplasmic reticulum (ER) and contains ribosomes on its
surface.
 The INM is lined with the nuclear lamina, composed of lamins A, B, and C.

NUCLEAR PORE COMPLEX (NPC)

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Large protein structures embedded in the nuclear envelope that regulate molecular transport
between the nucleus and cytoplasm.

NUCLEOPLASM AND CHROMATIN

 The nucleoplasm contains chromatin, which consists of DNA and associated proteins
 Involved in gene regulation and nuclear stability.

Key Proteins and Structures

 Nesprin: Links the cytoskeleton to the nuclear envelope.


 LAP1 and LAP2 (Lamina-associated polypeptides): Interact with the nuclear lamina and
chromatin.
 MAN1: An INM protein involved in signaling pathways.
 LBR (Lamin B receptor): Anchors chromatin to the nuclear envelope.
 Emerin: Important for nuclear structure and stability.
 BAF (Barrier-to-autointegration factor): Connects chromatin to the nuclear lamina.
 HP1 (Heterochromatin Protein 1): Plays a role in chromatin organization.
 SREBP1 and FOS: Transcription factors that regulate gene expression.
 MOK2, RB (Retinoblastoma protein), and GCL: Involved in chromatin organization and
gene regulation.

ENDOPLASMIC RETICULUM

 The Endoplasmic Reticulum (ER) is an extensive network of membranes in eukaryotic cells,


accounting for more than half of the total membrane in these cells.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 The term endoplasmic means “within the cytoplasm”, and reticulum is Latin for “little
net”.
 The ER is made up of interconnected membranous tubules and sacs known as cisternae
(from the Latin “cisterna,” meaning reservoir for a liquid).

Structure of the ER

 The ER has two main regions that differ in structure and function:
 Smooth ER (SER): Lacks ribosomes on its surface.
 Rough ER (RER): Has ribosomes
attached to its outer membrane,
giving it a “rough” appearance.

Cisternal Space / ER Lumen

 The ER membrane separates its internal


compartment, known as the ER lumen
(cavity) or cisternal space, from the
cytosol.
 The ER membrane is continuous with the
nuclear envelope, meaning the space
between the two nuclear membranes is
connected to the ER lumen

Functions of the Smooth ER

Lipid Synthesis

Enzymes in the smooth ER are crucial for the production of:

 Phospholipids – Important for cell membranes.


 Oils – Stored as energy reserves.
 Steroids – Includes vital hormones like testosterone and estrogen.
 Cells rich in smooth ER (e.g., testes, ovaries, and adrenal glands) specialize in
hormone production.

METABOLISM OF CARBOHYDRATES

 The smooth ER helps in breaking down and synthesizing carbohydrates to support cellular
energy needs.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

DETOXIFICATION OF DRUGS AND POISONS

 The smooth ER plays a significant role in detoxification processes, particularly in liver cells.
 Detoxification is achieved through two key phases:

1. Phase I Detoxification (Functionalization)


 Enzyme Involved: Cytochrome P450 (CYP450) enzyme family.
 Process: Hydroxyl (-OH) groups are added to drug molecules to increase polarity (water
solubility).
 Purpose: This modification prepares the drug for easier metabolism and elimination.

2. Phase II Detoxification
(Conjugation)
 The hydroxylated drug undergoes
conjugation reactions such as:
 Glucuronidation
 Sulfation

These reactions attach additional molecules to


enhance solubility.

Result: The modified drug becomes more


hydrophilic (water-attracting), enabling
excretion via urine or bile.

CALCIUM ION STORAGE

 The smooth ER acts as a storage site for calcium ions (Ca²⁺).


 In muscle cells, specialized smooth ER pumps calcium ions from the cytosol into the ER
lumen.

Calcium Release Process:

 When stimulated by a nerve impulse, calcium ions rush back into the cytosol, triggering
muscle contraction.
 In other cells, calcium release from the smooth ER triggers diverse cellular responses.

5
SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

Summary of Key Functions

Lipid synthesis: Creation of cell membrane components and hormones.

Carbohydrate metabolism: Breaks down and synthesizes sugars for energy.

Detoxification: Through Phase I (Functionalization) and Phase II (Conjugation).

Calcium ion storage: Crucial for muscle contraction and other cell functions.

Drug metabolism and excretion: Works with the liver and kidneys to remove toxins efficiently.

Cooperation of Liver and Kidney for Metabolism and Excretion of Drugs and Toxic Substances

1. Absorption
 Drugs are absorbed through the intestine into the bloodstream.
 Depending on their chemical properties, drugs can be:
 Lipid-soluble drugs – More challenging to eliminate directly as they dissolve in fats.
 Water-soluble drugs – Easier to eliminate through the kidneys.

2. Distribution in the Body


 Once absorbed, drugs circulate through the bloodstream.
 Their distribution depends on their solubility:
 Fat-soluble drugs – Often accumulate in body fat and require metabolism for proper
elimination.
 Water-soluble drugs – Readily dissolve in blood plasma and are excreted more
efficiently.

3. Plasma Protein Binding Rate


 Some drugs bind to plasma proteins in the blood, reducing their immediate availability
for metabolism or excretion.
 The higher the binding rate, the slower the drug is cleared from the body.

4. Metabolism (Liver’s Role)


 The liver plays a critical role in breaking down drugs, particularly lipid-soluble drugs
that are harder to eliminate.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 The liver uses drug-metabolizing enzymes, primarily Cytochrome P450 (CYP), to


modify these drugs.
 Phase I (Functionalization) – Enzymes add hydroxyl (-OH) groups to increase drug
polarity.
 Phase II (Conjugation) – Modified drugs undergo additional reactions to become more
water-soluble.
 This conversion helps transform lipid-soluble drugs into forms that can be excreted.

5. Excretion (Kidney’s Role)


 The kidney plays a major role in eliminating water-soluble drugs and the metabolites
formed by the liver.
 Key kidney processes include:
o Glomerular Filtration – Filters waste and toxins from the blood.
o Reabsorption – Useful substances are reabsorbed back into the blood.
o Excretion – Remaining waste and drugs are expelled through urine.

6. Drug Clearance
 Hepatic Clearance (CH): Refers to the liver’s role in breaking down drugs and
converting them into metabolites for easier elimination.
 Renal Clearance (CR): Refers to the kidney’s ability to filter and excrete drugs directly
or in their metabolized form.
 The total drug elimination rate is the combination of both hepatic and renal clearance.

Functions of Rough ER

 Rough ER (RER) is a membrane-bound organelle with ribosomes attached to its surface,


giving it a “rough” appearance.
 It plays a key role in protein synthesis,
membrane production, and transport of
cellular materials.

1. Protein Synthesis and Processing

 Ribosomes attached to the rough ER


synthesize proteins, especially those that
will be secreted or integrated into
membranes.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Example: Pancreatic cells synthesize insulin in the rough ER and release it into the
bloodstream.

2. Protein Folding

 Newly synthesized proteins enter the ER lumen, where they fold into their correct shapes.

3. Glycoprotein Formation

 Most secretory proteins become glycoproteins (proteins with carbohydrate chains).


 Specialized enzymes within the rough ER attach carbohydrates to these proteins.

4. Transport of Proteins

 The rough ER separates newly formed proteins from those that remain in the cytosol.
 Proteins destined for secretion or organelle use are packaged into transport vesicles.

5. Membrane Production

 The rough ER produces membrane phospholipids.


 As the ER membrane expands, it is transferred to other parts of the endomembrane system
via vesicles.

Transitional ER

Formation Process

1. ER Membrane Differentiation
 The rough ER (RER) contains
ribosomes that synthesize secretory
proteins.
 Some regions of the ER lack
ribosomes and specialize in vesicle
formation, called the transitional ER
(tER).
2. Coat Protein Recruitment
 The COPII (Coat Protein Complex II) machinery helps vesicles form by assembling at
the tER.
 Key COPII proteins include Sar1, Sec23/24, and Sec13/31.
3. Vesicle Budding and Cargo Selection

8
SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Secretory proteins, membrane proteins, and lipids are concentrated into vesicles at the
tER.
 Vesicles bud off from the ER and move to the Golgi apparatus or the ER-Golgi
Intermediate Compartment (ERGIC).
4. Dynamic Assembly and Disassembly
 The tER is dynamic, forming and disassembling based on cellular protein secretion
demands.
 Cells with high secretory activity (e.g., pancreatic and liver cells) have more
prominent tER regions

RIBOSOMES

 Definition: Ribosomes are essential cellular components responsible for protein synthesis.
 Structure: Composed of ribosomal RNA (rRNA) and proteins.
 Types of Ribosomes:
o Free Ribosomes: Suspended in the
cytosol, producing proteins that
function within the cytosol.
o Bound Ribosomes: Attached to the
rough endoplasmic reticulum (ER)
or nuclear envelope, producing
proteins for insertion into
membranes, organelle packaging, or
secretion.

Key Fact: Ribosomes can alternate between free and bound roles

Functions of Ribosomes

Protein Synthesis:

 Ribosomes translate messenger RNA (mRNA) into polypeptide chains.


 Cells with high protein synthesis rates have a large number of ribosomes (e.g., pancreatic
cells).

Enzyme Production:

 Ribosomes produce enzymes involved in cellular processes like sugar breakdown.

Protein Sorting:

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Free ribosomes produce cytosolic proteins.


 Bound ribosomes produce membrane-bound or secretory proteins.

Ribosomes and the Endoplasmic Reticulum (ER)

Guidance to the ER:

 Ribosomes are directed to the ER by a signal recognition particle (SRP) that halts translation
and guides the ribosome to the ER.
 The ribosome binds to the SRP receptor on the ER membrane.
 The protein is inserted into the translocon channel for further processing.

Protein Processing in the ER:

 Ensures proper folding and localization of proteins.


 Proteins intended for secretion, membrane embedding, or organelle delivery are processed
in the ER.

Bound Ribosome Functions

 Protein Secretion: Specialized cells like pancreatic cells use bound ribosomes to secrete
proteins such as insulin.
 Membrane Protein Production: Bound ribosomes synthesize proteins destined for
membranes or organelle packaging.
 Digestive Enzyme Production: Cells that produce digestive enzymes have a high number
of bound ribosomes.

Free Ribosome Functions

 Cytosolic Protein Production: Free ribosomes synthesize proteins that remain within the
cytosol.
 Enzyme Synthesis: Examples include enzymes that catalyze sugar breakdown.

Importance of Ribosomes

 Key Role in Metabolism: Active protein synthesis cells have prominent nucleoli to support
ribosome production.
 Flexibility: Ribosomes can switch between free and bound states depending on cellular
needs.

10
SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

GOLGI APPARATUS

Definition and Role

 Acts as a center for manufacturing, sorting,


warehousing, and shipping cellular products.
 Modifies products received from the ER and prepares
them for transport.

Importance in Cells

 Extensive in cells specialized for secretion.

Structure of Golgi Apparatus

Cisternae

 Flattened membranous sacs that compose the Golgi structure.


 Each stack separates its internal space from the cytosol.

Vesicles

 Located near the Golgi to facilitate material transfer between parts of the Golgi and other
cellular structures.

Polarity of the Golgi Apparatus

Structural Polarity

 Membranes on opposite sides differ in thickness and molecular composition.

Cis Face and Trans Face

 Cis Face: Located near the ER; receives incoming vesicles.


 Trans Face: Oriented toward the plasma membrane; dispatches vesicles to their
destinations.

Protein Pathway

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Proteins enter the Golgi via the cis face, move through the medial layers, and exit via the
trans face.

Transport Vesicles

Function

 Move materials from the ER to the Golgi.

Formation and Delivery

 Vesicles from the ER fuse with the Golgi membrane at the cis face.
 The trans face produces new vesicles that travel to other destinations.

Golgi Product Manufacturing and Sorting

Vesicle Formation

 Golgi packages proteins or lipids


into vesicles coated with proteins
like clathrin or COPII for cargo
selection.

Transport and Targeting

 Vesicles move through the


cytoplasm, guided by motor proteins.
 Rab proteins on the vesicle
membrane help identify the correct
organelle.

Docking

 When vesicles reach their destination, Rab proteins interact with tethering proteins to guide
vesicles to the correct docking site.

12
SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

Fusion

 v-SNARE proteins on vesicles bind with t-SNARE proteins on target membranes, ensuring
the membranes fuse properly.

Golgi Apparatus in Cellular Function

Refinement Process

 Golgi modifies and refines products in stages, using different enzymes within each
cisternae.

Molecular Tags

 Phosphate groups act as identification tags for proper sorting, similar to ZIP codes on mail.

Targeted Vesicles

 Vesicles may carry markers to ensure delivery to the correct organelle or membrane site.

Summary

Golgi Apparatus functions as the cell’s primary site for processing and distributing proteins and lipids.

Key stages: Vesicle Formation → Transport and Targeting → Docking → Fusion ensure efficient
product delivery.

LYSOSOMES

Introduction to Lysosomes

Definition: Membrane-bound sacs containing


hydrolytic enzymes that digest macromolecules.

Optimal Conditions: Enzymes work best in acidic


environments.

Functions:
13
SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

Intracellular digestion

Recycling organic cell material

Structure of Lysosomes

 Membrane-bound sacs containing hydrolytic enzymes.


 Formed by the Golgi apparatus.
 Acidic environment maintained by proton pumps in their membranes.

Structural Components:

 Lipid layer: Maintains structure


 Glycosylated membrane transport
proteins: Facilitate transport
 Hydrolytic enzyme mixture: Enables
digestion

Functions of Lysosomes

 Intracellular Digestion: Break down materials within the cell.


 Phagocytosis: Ingestion of particles by forming a food vacuole, which later fuses with a
lysosome for digestion.
 Autophagy: Recycling of the cell’s organic material.

Phagocytosis Process

Steps:

1. Engulfment: Formation of a food vacuole


by the plasma membrane.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

2. Fusion: The food vacuole fuses with a lysosome.


3. Digestion: Lysosomal enzymes break down the engulfed particles.
4. Absorption: Nutrients are absorbed by the cell.

Autophagy Process

Definition: The process by which cells degrade and recycle damaged organelles, proteins, and debris.

Steps:

1. Initiation at the PAS (Pre-Autophagosomal Structure):


 Proteins involved: Vac8, Atg13, and Atg9 vesicles organize this site.
 Recruitment of downstream PAS factors triggers autophagosome formation.

2. Phagophore Formation:
 Endoplasmic Reticulum (ER) contributes lipids for membrane expansion.
 Atg9 vesicles and Atg2 assist in lipid transfer.
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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

3. Phagophore Expansion and Maturation:


 The phagophore expands, fusing with additional vesicles to form a double-membraned
autophagosome.
 The autophagosome surrounds cellular material targeted for degradation.

4. Autophagosome Completion:
 Once fully enclosed, the structure is known as an autophagosome.
 PAS factors are released when the autophagosome is complete.

5. Fusion and Cargo Degradation:


 The autophagosome fuses with a lysosome (or vacuole in plants/yeast).
 This results in the release and degradation of cellular waste, recycling the contents.

Importance of Lysosomes and Autophagy

Lysosomes: Essential for maintaining cellular health by removing damaged structures and digesting
nutrients.

Autophagy: Crucial for cell survival during stress, aging, and immune responses.

Key Visual Flow of Autophagy Process

Initiation → Phagophore Formation → Expansion and Maturation → Completion → Fusion and Cargo
Degradation

16
SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

VACUOLES

Introduction to Vacuoles

 Definition: Membrane-bound organelles found in various types of cells with diverse


functions.
 General Functions:
 Storage of nutrients, ions, and waste.
 Maintenance of cell structure, turgor pressure, and detoxification.
 May contain pigments that provide color or defensive compounds for protection.

Types of Vacuoles

1. Central Vacuole (Plants)

Main Characteristics:

 Integral part of the endomembrane system.


 Major storage site for inorganic ions and organic compounds.
 Holds reserves of important nutrients.
 Plays a major role in plant cell growth.

Functions:

 Hydrolysis: Assists in breaking down molecules.


 Storage: Retains organic compounds and ions like potassium (K+), sodium (Na+), chloride
(Cl-), and calcium (Ca2+).
 Maintains Turgor Pressure: Helps plants maintain structure and hydration.
 Defense Mechanism: Stores pigments and defensive compounds that deter herbivores.
 Herbivory Defense in Allium Plants (e.g., Garlic & Onion):
 Enzyme Alliinase stored separately from sulfur compounds (ASCO complex) inside
vacuoles.

Upon damage, the enzyme interacts with sulfur compounds to produce:

 Diallyl disulfide and trisulfide (responsible for strong odors).

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Allylmethyl sulfide and Hydrogen sulfide (H₂S) contribute to pungent smells and herbivore
defense.

2. Food Vacuole (Protists & Some Animals)

Formation: Created through phagocytosis.

Function:

 Enzymes digest food particles for nutrient absorption into the cytosol.

Common in:

 Ciliates (e.g., Paramecium).


 Sporozoans (e.g., Plasmodium).

 Food Vacuole in Malaria Parasite (Plasmodium):


 Located inside infected red blood cells (erythrocytes).

Digests hemoglobin as a nutrient source.

Steps in Hemoglobin Digestion:

1. Hemoglobin Uptake: Transported from erythrocyte to vacuole via endocytosis.


2. Enzymatic Breakdown: Proteases (FP, PM, FLN, HDP) break hemoglobin into amino acids.
3. Formation of Haemozoin: Toxic byproduct formed as crystalline structures inside vacuoles.
4. Lipid Droplets & Haemozoin Aggregation: Lipid droplets aid haemozoin crystallization.
5. Oligopeptide Release: Oligopeptides exit vacuole to fuel parasite metabolism.

Antimalarial Drugs (e.g., chloroquine, artemisinin) target the food vacuole to inhibit hemoglobin
digestion.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

3. Contractile Vacuole (Protists)

Main Characteristics:

 Found in freshwater protists like amoeba and paramecium.

Function:

 Regulates osmotic balance by expelling excess water.


 Prevents cell rupture by maintaining internal water pressure.

Step-by-Step Process:

1. Water enters due to osmosis.


2. Excess water collects in the contractile vacuole.
3. The vacuole swells.
4. The vacuole moves to the cell membrane.
5. The vacuole contracts and expels water.
6. The cycle repeats.

Central Vacuoles in Allium Plants (e.g., Garlic, Onion)

Function: Biochemical defense mechanism against herbivory.

Key Process:

 The enzyme alliinase is stored separately from its substrate, alliin (a sulfur-containing
compound), inside vacuoles.
 When plant tissues are damaged (e.g., chewing or cutting), alliinase interacts with alliin to
produce sulfur compounds.

Breakdown Products:

 Diallyl disulfide and trisulfide – Responsible for the strong odor of garlic and onions.

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SESE 117: CELL AND MOLECULAR
BIOLOGY
Cell and molecular biology are a branch of biology that focuses on understanding the structure,
function, and behavior of cells and the molecules that make them up.

 Allylmethyl sulfide and Hydrogen sulfide (H₂S) – Contribute to the pungent smell and act
as a deterrent against herbivores and microbes.

4. Gas Vacuoles

Structure: Appear as gas-filled sacs within certain microorganisms.

Key Characteristics:

 Freely permeable to atmospheric gases.


 Allow and control buoyancy.

Common in:

 Cyanobacteria
 Some bacteria and archaea.

Summary

Central Vacuoles: Key in plant cell structure, storage, and herbivore defense.

Food Vacuoles: Found in protists and Plasmodium; involved in digestion and nutrient absorption.

Contractile Vacuoles: Important in freshwater protists for maintaining osmotic balance.

20

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