20162016
IEEE6th
6thInternational
InternationalAdvanced
Conference
Computing
on Advanced
Conference
Computing
A Critical Study of Classification Algorithms
Using Diabetes Diagnosis
Dharmaiah Deverapalli
Professor, Department of Information Technology
Panigrahi Srikanth Shri Vishnu Engineering College for Woman,
Junior Research Fellow Bhimavaram,
Department of Information Technology dharma@[Link]
VNR VJIET, Hyderabad,Telagana,INDIA
information Diabetes .It is identify is positive r
[Link]@[Link]
negative (7).
Abstract-This paper predicts the Diabetes Disease based on
[Link] DESCRIPTION
Data Mining Techniques of Classification Algorithms.
Classification Algorithm and tools may reduce heavy work
Generally diabetes is categorized in to two
types Type 1 and Type 2 disease. Type-1 may account
on Doctors. In this paper Evaluated as Classification
for 5% to 10%, Type-2 90% to 95%, Gestational
Algorithms for the Classify of some Diabetes Disease
diabetes during Pregnancy 5% to10% other types
Patient Datasets. Data Mining is one of the main Algorithm
Diabetes Miletus 1% to 5% .
is Classification .Classification Algorithm Examine of the
It is use to calculations of the Data Mining
Decision Tree Algorithm, Byes Algorithm and Rule based
Classification Methods. PID has eight conditional
Algorithm. These algorithms are evaluate Error Rates and attributes and two decision attributes (8).
identify of the patients based evolution Function of the
measure the accurate results. Min Median Mean Max SD
Index Terms- Pima Diabetes Disease Data set, A1 0.00 3.00 3.845 17.00 3.369578
A2 0.0 117.0 120.9 199.0 31.97262
Classification Algorithm, Decision Tree Algorithm, Byes
A3 0.0 72.00 69.11 122.0 19.5581
Algorithms and Rules. A4 0.00 23.0 20.54 99.0 15.95222
I. INTRODUCTION A5 0.0 30.5 79.8 846.00 115.244
Diabetes is Fourth Leading Disease of the A6 0.0 32.00 31.99 67.10 7.84416
A7 0.0780 0.3725 0.4719 2.4200 0.3313
death rate Developing many countries Han, J [Link] (1) A8 21.00 29.00 33.24 81.00 11.706
Tina [Link] [Link], Proposed System Classify data is
using Classification Algorithm. It is main focus on the TABLE I: PID DATASET SUMMARY
Navi Bayes Probability based and J48 algorithm is Number of Attributes: 8
decision tree of Classification [Link] this Number of Classes: 2
paper main evaluated as accuracy, sensitivity and A. Pregnant:
specificity( 2).Raj Kumar [Link], Proposed System is Number of times pregnant is Continuous
Classification by using Genetic Algorithm. They are .One patient number of times pregnant. It is consider
Classification Techniques Classify mainly Naïve to 3 types of levels Low, Medium and High. Low is
Bayesian, ID3, C4.5, CART, kNN, SVM [Link] (1or 2 times pregnant), Medium is (3, 4 and 5 times
algorithm based implemented as the Diabetes data set pregnant) and High is above 6 times pregnant.
and results are compared (3).Jahanvi Joshi [Link], B. Plasma Glucose
Research on Diagnosis breast cancer patients. Plasma Glucose is mainly fasting blood
proposed system is Breast cancer data set is used to glucose, 1hour, 2hour and 3 hour. Glucose testing is
identify patient and problem solved to clinical research mainly time based considered.
based on different classification techniques Pregnant patient Glucose level is mainly less
(4).[Link] Kumar [Link], propose of the decision than 140mg/dl is Normal Glucose tolerance has low
trees algorithm and Bayes algorithm to classify these level, from 140 to 199mg/dl is prediabeties and greater
diseases (5).[Link],Data Mining Algorithms is than are equal to 200 mg/dl is Diabetes.
used to predicted Diabetes Disease and Accreted C. Diastolic Blood Pressure (DBP)
.problem is main to the Fuzzy systems based on DBP is called as Diastolic blood pressure.
Genetic algorithm is implemented and it is introduced DBP is measured as mm Hg .Blood Pressure is two
as new learning algorithm of adaption capabilities (6) types the top number is your blood pressure. Those
Gaganjot Kaur [Link],Data Mining is one of the ranges values is 40 -50 low level,60-80 ideal blood
techniques is Classification .It is mainly implemented pressure ,80-90 is pre-high blood pressure and 90-100
as J48 is Classifier used to calculate accurate results .It High blood Pressure.
is calculated as mainly followed as Collects more D. Triceps skin fold thickness (TSFT):
978-1-4673-8286-1/16 $31.00 © 2016 IEEE 240
245
DOI 10.1109/IACC.2016.54
TSFT is called as Triceps skin fold thickness. The rule consists of ‘if part’ and ‘then part’ those are
It is measured as mm and Body fact calculated .Body using to conditions based on apply classification
fact percentages in excess is men’s and women’s. algorithms [9].
Triceps skin fold thickness in Women’s is 30-35% P then Q Where apply conditions
E. Two-Hour serum insulin (2hr-SI) P is the No. of attributes in the rules
2Hr is called as2-Hour serum insulin is Q is classes of the rule.
measured as mu U/ml. 2-Hour serum insulin is P ˄ Q the no of patients in the dataset that are
calculating process is Fasting ,30 mints satisfying conditions of the rule.
,1hour,2hour,3hour Glucose Administrations. Insulin Confidence: Conf (Confidence) of the Rule R can be
Levels is Fasting Glucose Administration is below 25 defined used.
mu U/ml, 1 hour Glucose Administration is 30-230 mu /^/
Confidence =
//
[eq.1]
U/ml,2 hour Glucose Administration is below 18-276
mu U/ml and 3 hour Glucose Administration is below Converge: Conv (Converges) of the Rule R can be
25 mu U/ml. defined used.
F. Body Mass Index /^/
Coverage = [eq.2]
BMI is measured as weight in kg/(height in //
m)^2 .Body Mass Index is Ranges(Women’s) are Gain = Confidence – Coverage. [eq.3]
Underweight <18.5 kg/mt (Low level),Normal weight The Diabetes Disease Attributes are 8 and Classes
18.5 to -22.9 kg/mt(Medium) ,Overweight 23-24.9 are 2,These are using developed Several rules .For
kg/mt(High) and Obesity 25 above(Very High). those 8 parameters using [Link] conditions
G. Diabetes Pedigree Function (DPF) discussed below.
DPF is considering to 3 types of levels Low, 1) Case 1: Diabetic Condition:
Medium and High. Low is below 0.4; Medium is 0.4 If (Age between 20-45) and (pregnant is above 6 ) or
to 0.8 and high is above 0.8. (plasma glucose >150) or (Diastolic BP>90) or (BMI
H. Age: > 25) or (DPF > 0.8) or then Diabetes Mellitus is high
Age in Continuous .Age is divided into 3 2) Case 2: Pre Diabetic Condition
levels 20-39, 40-59, 60 above. If (Age between 20-45) and (pregnant is 3,4,5 ) or
I. Class: (plasma glucose 90-150) or (Diastolic BP 80-90) or
Class is Positive and Negative .Positive is (BMI 18.5 -25) or (DPF 0.4-0.8) or then Diabetes
Diabetic and Negative is Non Diabetic. Mellitus is Medium
III. METHODOLOGY 3) Case 3: Healthy Condition
Classification is predicts categorical Class If (Age between 20-45) and (pregnant is 1,2) or
labels like Positive or Negative based on Classification (plasma glucose <90) or (Diastolic BP<80) or (BMI
Algorithms. <18.5) or (DPF <0.4) or then Diabetes Mellitus is
A Researcher developed Machine Learning low.(10,11)
as Decision tree algorithm. It also known as [Link] is Example
uses in statistics, Data mining and machine learning. In This PID Diabetes Dataset is using apply decision
(5) Classification is based on Bayes’s Theorem or tree algorithm .Training Data set of Attributes is 8 and
Algorithm. No of Classes is Two. Identify patients applying Rule
A. Classification Process of conditions will be Calculations patient severity and
Classification process is mainly defined as Accurate Results.
Diabetes Disease Training Data and Testing Data This problem will be Apply above Methodology and
analyzed to Classification Algorithm. Classification of Rules.
the data can be Calculate the accurate Results. If (Age between 20-45) and (pregnant is above 6 ) or
Classifier Rules defined as mainly Bayesian (plasma glucose >150) or (Diastolic BP>90) or (BMI
Classification, Decision Tree Classification and Rule > 25) or (DPF > 0.8) or then Diabetes Mellitus is high
based Classification. Sample Output procedure (Execution Value) This
This paper we used Decision tree algorithm condition value =5, (Either true value is 5 or false
and Bayesian Classification to generate individual value is 9).
classification rules from the given set of training data We apply Methodology
items. P value is =8
B. Decision Tree Algorithms: Q value is = 2
Decision Tree as predictive Data model.C4.5 P^Q condition value is 5(True Condition: Yes)
Extension of earlier of the ID3 algorithm. It is weka Confidence value =5/8=0.625
data or statistical measure (e.g., information gain). Converges value = 5/2= 2.5
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Gain = Conf – conv = 0.625-2.5 =-1.875(we can take are derived in the following as A = (Pregnant, plasma
positive only) Glucose,DBP,TSFT,2-Hr SI, BMI, DPF, Age)
Gain = 1.875. Step 2:
P^Q condition Value is 9(False Condition: No) Next have to consider the class C1,C2-----Cm
Confidence value =9/8 = 1.125 those involved. In the followed to Diabetes is positive
Converges value = 9/2= 4.5 and negative.
Gain = Conf – conv = 1.125 - 4.5 =-3.375 (we can take Step 3:
positive only) Next we have to apply the byes theorem.
Gain = 3.375.(9). Step 4:
C. Bayesian Classification Above formula to find out p(A) by using
Bayesian of Statistical Classifier performs Diabetes is class of information.
probabilistic prediction. This Classification Founded Byes Classification.
as Baye’s Theorem. It is Performance of the simple Apply Conditions We need to p (B/A) p (A)
Bayesian Classifier, Naïve Bayesian Classifier; it has P (Diabetes Disease _yes) = 6/10 = 0.6.
comparable performance with Decision Tree P (Diabetes Disease _no) = 4/10 =0.4.
Algorithm and selected Neural Network Classifier (1). Step 5:
Next we have to calculate p(B\A) for each and every
attribute separated and then multiply them.
( )
Bayes Theorem P (A/B) = (1) To Compute the P (B/A)
( )
P (Age = 25 and DM_Disease = yes) = 3/6 = 0.5.
Example: P (age = 25 and DM_Disease = No) = 1/4 = 0.25.
TABLE II: NAIVE BAYESIAN CLASSIFICATION DIABETES P (DPF <0.4 and DM_Disease = yes) = 5/6 = 0.833
SAMPLE DATASET P (DPF<0.4 and DM_Disease =yes) =1/4 = 0.25.
A1 A2 A3 A4 A5 A6 A7 A8
Diab P (BMI > 25 and DM_Disease = yes)= 4/6 = 0.666.
etes P (BMI >25 and DM_Disease = No)=2/4 = 0.5.
P (2HrSI >30 and DM_Disease = yes) = 2/6 = 0.333.
1 110 49 29 0 0 0.351 27 1 P (2HrSI >30 and DM_Disease = No) = 2/4 = 0.5.
P (TSFT<25 and DM_Disease = yes) = 2/6 = 0.333.
0 168 70 0 1 23.6 0.627 25 0 P (TSFT<25 and DM_Disease = No) = 1/4 = 0.25.
P (DBP>50 and DM_Disease = yes) = 5/6 = 0.833.
6 139 80 39 16 26.6 0.167 37 1 P (DBP>50 and DM_Disease = No) = 3/4 = 0.333.
5 88 90 23 8 28.3 2.288 36 1 P (PGC >100 and DM_Disease = yes) = 4/6 = 0.666.
3 115 96 24 88 43.1 0.201 30 1 P (PGC >100 and DM_Disease = No) = 2/4 = 0.5.
P (PRG >4 and DM_Disease = yes) = 3/6 = 0.5.
2 103 40 29 54 25.6 0.248 37 0
P (PRG >4 and DM_Disease = No) = 1/6 = 0.166.
8 107 60 45 0 30.5 0.587 50 1 Using Above probabilities, we can obtain the
5 92 64 32 38 35.5 0.551 32 0 P (B/ DM_Disease = yes) = P (Age = 25 and
2 89 66 0 30 0 0.381 33 1 DM_Disease = yes) *
1 90 58 19 0 20 0.529 34 0
P (DPF <0.4 and DM_Disease = yes) *
P (2HrSI >30 and DM_Disease = yes)*
TABLE III: SAMPLE DATASET SUMMARY P (BMI >25 and DM_Disease =yes)*
P (TSFT<25 and DM_Disease = yes)*
MIN Median Mean Max P (DBP>50 and DM_Disease = yes)*
A1 0.00 2.50 3.30 8.00 P (PGC >100 and DM_Disease = yes)*
A2 88.0 105.0 110.1 168.0 P (PRG >4 and DM_Disease = yes)
A3 40.0 65.0 67.3 96.0 P (B/ DM_Disease = yes ) =
A4 0.00 26.50 24.00 45.00
A5 0.00 12.00 23.50 88.0
0.5*0.8333*0.666*0.333*0.333*0.833*0.666*0.5 =
A6 0.00 26.10 23.32 43.10 0.00853
A7 0.167 0.4550 0.5930 2.2880 P(B/ DM_Disease = No ) =
A8 25.00 33.50 34.10 50.00 0.25*0.25*0.5*0.5*0.25*0.75*0.5*0.166 = 0.00024
Diabetes 0.00 1.00 0.6 1.0 Step 6:
We Compute P(A\B)
Step 1: P (B/DM_Disease =Yes) P(DM_Disease =yes) =
Consider the sample data which is 0.00853 * 0.6 =0.0051.
represented with A = (A1,A2----An),whereas A1,A2 P (B/DM_Disease =No) P(DM_Disease =No) =
0.00024 * 0.4 = 0.0000972.
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Therefore , Diabetes Disease _Yes = 0.0051 error
Diabetes Disease _No = 0.0000972.[1]
D. Evaluation Function Relative
52.43 75.08 76.49 61.680
59.6
To evaluate of function True Positive (TP), absolute 855 0%
39% 42% 74% 2%
error %
False Positive (FP), True Negative (TN) and False
Root
Negative (FN) 81.3
relative 72.42 81.45 87.47 77.357
426 0%
True positive rate(TPR) = diagonal element (TP) / sum squared 07% 72% 42% 2%
%
of relevant row (TP +FN). error
False positive rate(FPR) = non-diagonal element (FN) Bayes Tree Algorithm is followed as
/ sum of relevant row (TP +FN). NaviBayes,Bayes Net ,NaviBayes Updateable.
Precision = diagonal element (TP) /sum of relevant
column (TP +FN). TABLE V: BYES ALGORITHMS USING CALCULATED
Recall = diagonal element (TP)/ sum of relevant row ERROR RATE.
(TP +FN)
Bayesian Classification Algorithm
F-Measures = 2*precision*recall / (precision + recall).
NaviByes
Accuracy = TP+TN / (TP+TN+FP+FN). (9). NaviBayes ByesNet
Updateable
IV. RESULTS Kappa
0.4674 0.4674 0.4674
The Classification Algorithm with the statistic
Mean
produced classification methods calculate of the absolute 0.2811 0.2811 0.2811
accurate Results. Decision tree Algorithm and bayes error
Classification approach to construct Evolution Root mean
Function for the diagnosis of Diabetes Disease squared 0.4133 0.4133 0.4133
error
.Interval between performance measure in the
Relative
computational intelligence techniques Roc Area and absolute 61.8466% 61.8466% 61.8466%
accuracy. The skill of the model to correctly predict errors
the class label of previously unseen or new data is Root relative
defined as accuracy. squared 86.7082% 86.7082% 86.7082%
error
Performance of measuring is followed to calculated as
Classification Algorithm .Classification Algorithm are
Classification Algorithm of the Decision Tree
mainly Decision Tree Algorithm ,Bayes Algorithm
Algorithm are performance measures to as using into
and Rule based .Those Algorithm Calculated as
J48 ,AD Tree,BF Tree, LAD Tree,NB Tree , Random
Accurate Results.
Tree .Those Algorithm Calculated as Accurate
Decision Tree Algorithm is followed as J48, Ad
Results.
(Activate Directory) Tree , BF Tree,LAD Tree,NB
Tree, Random Tree. Whether we calculated as
Accurate Results. TABLE VI: DECISION TREE ALGORITHM IN
DETAILED ACCURACY BY CLASS (WEIGHTED AVG OF
TABLE IV: DECISION TREE ALGORITHMS USING TP AND TN)
CALCULATED ERROR RATE.
Decisicion Tree Algorithm
Decision Tree Algorithm
Rand BFTr LAD NBTr Rando
ADTr BFTr LAD NB J48 ADTree
J48 omTr ee Tree ee mTree
ee ee Tree Tree TP
ee 0.841 0.797 0.772 0.807 0.783 1
640 593 601 Rate
Correctly 612 620 FP
(84.1 (77.2 (78. 768(1 0.241 0.277 0.326 0.238 0.26 0
Classified (79.68 (80.72 Rate
146% 135% 2552 00%)
Instances 75%) 92%) Precis
) ) %) 0.842 0.793 0.767 0.806 0.783 1
122 175 167 ion
Incorrectly 156 148 Recall 0.841 0.797 0.772 0.807 0.783 1
(15.8 (22.7 (21. 0
Classified (2.312 (19.27
854% 865% 7448 (0%) F-
Instances 5%) 08%)
) ) %) Meas 0.836 0.793 0.764 0.807 0.783 1
Kappa 0.631 0.537 0.470 0.52 ure
0.5729 0
statistic 9 7 5 18 ROC
0.8-88 0.868 0.74 0.872 0.851 1
Mean Area
0.238 0.341 0.347 0.27
absolute 0.2803 0 Classification Algorithm of the Decision Tree
3 3 7 13
error
Algorithm are performance measures to as using into
Root mean 0.345 0.388 0.416 0.38
2 3 9
0.3687
77
0 J48 ,AD Tree,BF Tree, LAD Tree,NB Tree , Random
squared
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Tree .Those Algorithm Calculated as Accurate Using Data Mining “ IJCSI International Journal
Results. of Computer Science Issues, Vol. 8, Issue 3, No.
TABLE VII: BAYES TREE ALGORITHM: DETAILED 1, May 2011,ISSN (Online): 1694-
ACCURACY BY CLASS (WEIGHTED AVG OF TP AND TN). 0814,[Link].
[6] S.Sapna1, [Link] and [Link] Kumar
Bayesian Classification Algorithms “Implementation of Genetic Algorithm in
NaviBaye
ByesNet
NaviByes Predicting Diabetes”IJCSI International Journal of
s Updateable Computer Science Issues, Vol. 9, Issue 1, No 3,
TP Rate 0.763 0.763 0.763 January 2012, ISSN (Online): 1694-0814,
FP Rate 0.305 0.305 0.305 [Link].
Precisio [7] Gaganjot Kaur and Amit Chhabra “ Improved J48
0.759 0.759 0.759
n Classification Algorithm for the Prediction of
Recall 0.763 0.763 0.763 Diabetes” International Journal of Computer
F-
0.76 0.76 0.76 Applications (0975 – 8887) Volume 98 – No.22,
Measure July 2014.
ROC
Area
0.825 0.825 0.825 [8][Link]
+Diabetes.
[9] Panigrahi Srikanth,[Link] and [Link] “a
V. CONCLUSION
Classification is an important problem in the computational intelligence technique for effective
very quickly emerging field of Data mining. Popular medical diagnosis using decision tree algorithm” i-
Classification Algorithms were considered for manager’s Journal on Computer Science, Vol. 3 l
Evaluating their classification algorithm is No. 1 l March - May 2015.
performance measurements can apply than calculate [10] Dharmaiah Devarapalli, Allam Apparao, Amit
Accurate Results in classifying Diabetes pregnant Kumar, G R Sridhar “A Novel Analysis of
patient’s pima dataset and mainly classified data then Diabetes Mellitus by Using Expert System Based
applied classification techniques. Those calculations on Brain Derived Neurotrophic Factor” , Helix
based on identified Error rates and Diabetes patients Vol. 1:251-256 (2013)
can be identified. [11] Panigrahi srikanth,Dharmaiah Devarapalli
Future enhancement is this dataset using “Identification of AIDS Disease using Genetic
Linear Regression Model or Logistic regression Model Algorithm “Springer, Briefs in Forensic and
based on Clustering can be identify specific attribute Medical Bioinformatics .ISBN:978-981-287-337-
based then easily identify of the patients. 8
[Link]
[1] Jiawei Han and kamber “Data Mining Concepts
and techniques”.
[2] Tina R. Patil and Mrs. S. S. Sherekar”Performance
Analysis of Naive Bayes and J48 Classification
Algorithm for Data Classification” International
Journal of Computer Science and Applications
Vol. 6, No.2, Apr 2013 ISSN: 0974-1011 (Open
Access).
[3] Raj Kumar, Rajesh Verma “Classification Rule
Discovery for Diabetes Patients by Using Genetic
Programming” “International Journal of Soft
Computing and Engineering (IJSCE),ISSN: 2231-
2307, Volume-2, Issue-4, September 2012.
[4] Jahanvi Joshi and RinalDoshi Dr. Jigar Patel
“Diagnosis and Prognosis Breast Cancer Using
Classification Rules" International Journal of
Engineering Research and General Science
Volume 2, Issue 6, October-November,
2014,ISSN 2091-2730.
[5] [Link] Kumar, [Link] and [Link]
“Decision Support System for Medical Diagnosis
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