Appendix ‒ Fragmentation Patterns
1. Straight-chain alkanes
● e.g. Mass spectrum of hexane, C6H14
[CH3CH2CH2CH2---CH2CH3]•+ CH3CH2CH2CH2+ + •CH2CH3
molecular ion (m/e= 86) butyl ion (m/e = 57)
[CH3CH2CH2---CH2CH2CH3]•+ CH3CH2CH2+ + •CH2CH2CH3
molecular ion (m/e= 86) propyl ion (m/e = 43)
[CH3CH2---CH2CH2CH2CH3]•+ CH3CH2+ + •CH2CH2CH2CH3
molecular ion (m/e= 86) ethyl ion (m/e = 29)
[CH3---CH2CH2CH2CH2CH3]•+ CH3+ + •CH2CH2CH2CH2CH3
molecular ion (m/e= 86) methyl ion (m/e = 15)
Appendix ‒ Fragmentation Patterns 1
2. Branch-chain alkanes
● e.g. Mass spectrum of methylbutane
+
molecular ion (m/e= 72) secondary carbocation
(m/e = 57)
+
molecular ion (m/e= 72) secondary carbocation
(m/e = 43)
+
molecular ion (m/e= 72) primary carbocation
(m/e = 29)
Appendix ‒ Fragmentation Patterns 2
● e.g. Mass spectrum of dimethylpropane
+
molecular ion (m/e= 72) tertiary carbocation
(m/e = 57)
Stability of carbocation:
> >
tertiary carbocation secondary carbocation primary carbocation
Appendix ‒ Fragmentation Patterns 3
3. Haloalkanes
● e.g. Mass spectrum of iodomethane (CH3I)
Only one stable isotope: 127I
● e.g. Mass spectrum of bromomethane (CH3Br)
Isotope Relative abundance
79
Br 50.54%
81
Br 49.46%
Appendix ‒ Fragmentation Patterns 4
● e.g. Mass spectrum of chloromethane (CH3Cl)
Isotope Relative abundance
35
Cl 75.53%
37
Cl 24.47%
Appendix ‒ Fragmentation Patterns 5
4. Aromatic compounds
● e.g. Butylbenzene
+
molecular ion (m/e= 134) Benzylic cation (m/e = 91)
5. Aldehydes and Ketones
● e.g. Butanone
Appendix ‒ Fragmentation Patterns 6
6. Carboxylic acids and Acid Derivatives (e.g. Esters & Amides)
● e.g. Mass spectrum of benzoic acid
C6H5CO+ + •OH
molecular ion (m/e= 122) (m/e = 105)
C6H5+ + •COOH
molecular ion (m/e= 122) (m/e = 77)
Appendix ‒ Fragmentation Patterns 7