Cognitive Science 6/25/24, 12:07 AM

GENERAL CATALOG

2024-25 Catalog of Record

Cognitive Science
[ undergraduate program | graduate program | faculty ]

All courses, faculty listings, and curricular and degree requirements described herein are
subject to change or deletion without notice.

Courses
For course descriptions not found in the UC San Diego General Catalog 2024–25,
please contact the department for more information.

Lower Division
COGS 1. Introduction to Cognitive Science (4)

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A team-taught course highlighting development of the field and the broad range of topics
covered in the major. Example topics include addiction, analogy, animal cognition, human-
computer interaction, language, neuroimaging, neural networks, reasoning, robots, and
real-world applications.

COGS 2. Cognitive Neuroeconomics (4)

This course is an introduction to the neuroscience behind the principles of economic
decision-making. The topics in this course are aimed at exploring the underlying cognitive
and neural mechanisms that drive the decisions behind traditional economic models.

COGS 3. Introduction to Computing (4)

Covers the fundamental concepts that underlie all programming languages and provides
an introduction to the essential information about algorithms and data structures. Students
design and implement web applications using HTML5, CSS3, JavaScript, and Photoshop.
No previous programming experience is required.

COGS 8. Hands-on Computing (4)

Introductory-level course that will give students hands-on experience with robotics,
Python programming, and integrating cognitive principles for robot
interaction. Prerequisites: freshman and sophomore standing. (No prior programming
experience required.)

COGS 9. Introduction to Data Science (4)

Concepts of data and its role in science will be introduced, as well as the ideas behind
data-mining, text-mining, machine learning, and graph theory, and how scientists and
companies are leveraging those methods to uncover new insights into human cognition.

COGS 10. Cognitive Consequences of Technology (4)

This course examines the interrelationships of cognition and technology from the
perspective of cognitive science. We address questions of importance for our increasingly
technological society: How does technology shape our minds? How should what we know
about our minds shape technology?

COGS 11. Minds and Brains (4)

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How damaged and normal brains influence the way humans solve problems, remember or
forget, pay attention to things; how they affect our emotions, and the way we use language
in daily life.

COGS 12. Language, Culture, and Cognition (4)

Do people who speak different languages think differently? Does learning new languages
change the way you think? Are some thoughts unthinkable without language? Course will
bring together ideas and findings from psychology, linguistics, anthropology, neuroscience,
and philosophy.

COGS 13. Field Methods: Studying Cognition in the Wild (4)

This course introduces students to multiple methods to investigate cognition and behavior
in natural settings. Students will learn about ethnography, videography (video data
collection, coding, and analysis), surveys design and conducting interviews, and how to
move from observations to modeling.

COGS 14A. Introduction to Research Methods (4)

Introduction to the scientific method. Methods of knowledge acquisition, research
questions, hypotheses, operational definitions, variables, control. Observation, levels of
measurement, reliability, validity. Experimentation and design: between-groups, within-
subjects, quasi-experimental, factorial, single-subject. Correlational and observational
studies. Ethics in research.

COGS 14B. Introduction to Statistical Analysis (4)

Introduction to descriptive and inferential statistics. Tables, graphs, measures of central
tendency and variability. Distributions, Z-scores, correlation, regression. Probability,
sampling, logic of inferential statistics, hypothesis testing, decision theory. T-test, one and
two-way Anova, nonparametric tests (Chi-square). Prerequisites: COGS 14A.

COGS 15. What the *#!?: An Uncensored Introduction to Language (4)

This course uses the study of swearing to introduce topics in language: how children learn
it, why it changes over time, and how people pronounce and understand it. Students who
believe they could be offended by the study of swearing and other taboo language might
not find this course appropriate for them.

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COGS 17. Neurobiology of Cognition (4)

Introduction to the organization and functions of the nervous system. Topics include
molecular, cellular, developmental, systems, and behavioral neurobiology. Specifically,
structure and function of neurons, peripheral and central nervous systems, sensory, motor,
and control systems, learning and memory mechanisms. (Students may not receive credit
for both BILD12 and COGS 17. This course fulfills general-education requirements for
Marshall and Roosevelt Colleges as well as Warren by petition.)

COGS 18. Introduction to Python (4)

This class will teach fundamental Python programming skills and practices, including the
“Zen of Python.” Students will focus on scientific computing and learn to write functions
and tests, as well as how to debug code using the Jupyter Notebook programming
environment. Students may receive credit for one of the following: BILD 62, COGS 18,
CSE 8A, or CSE 6R. Recommended preparation: students with limited computing
experience may take COGS 3.

COGS 20. Exploring the Musical Mind (4)

(Cross-listed with MUS 20.) How do we transform complex sounds into comprehensible
and meaningful music? What physiological, neurological, cognitive, and cultural systems
are involved? Why do we make music in such diverse ways around the globe? Does music
have evolutionary or ecological significance? What is the relationship between music,
motion, and emotions? This course explores contemporary understandings of how we
hear and how we become musical and invites students to listen to new music in new
ways. Students may not receive credit for both COGS 20 and MUS 20.

COGS 87. First-year Seminar (1)

The First-year Student Seminar Program is designed to provide new students with the
opportunity to explore an intellectual topic with a faculty member in a small seminar
setting. First-year Student seminars are offered in all campus departments and
undergraduate colleges, and topics vary from quarter to quarter. Enrollment is limited to
fifteen to twenty students, with preference given to entering first-year students.

COGS 90. Undergraduate Seminar (1)

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Special topics in cognitive science are discussed. P/NP grades only. (May be repeated
when topics vary.)

COGS 91. SCANS Presents (1)

The department faculty and the Students for Cognitive and Neurosciences (SCANS) offer
this seminar exploring issues in cognitive science. It includes informal faculty research
presentations, investigations of topics not covered in the curriculum, and discussions on
graduate school and careers. (May be repeated when topics vary.)

COGS 92. Resiliency in the Face of Adversity (2)

Psychological resiliency will be addressed both scientifically and pragmatically. Students
will explore the way cognitive and behavioral factors contribute to one’s ability to cope
with the stresses of life and emerge from them stronger than before. P/NP only.

COGS 99. Independent Study (2 or 4)

Independent literature or laboratory research by arrangement with and under direction of a
Department of Cognitive Science faculty member. Prerequisites: lower-division standing,
completion of thirty units of UC San Diego undergraduate study, a minimum UC San Diego
GPA of 3.0, and a completed and approved Special Studies form.

Upper Division
COGS 100. Cyborgs Now and in the Future (4)
Covers the theories of situated, distributed, enactive, and embodied cognition. Explains
how cyborgs are a natural consequence of our current understanding of embodied minds
embedded in culturally shaped niches; how mental systems can be distributed over other
people and things. Prerequisites: COGS 1 or COGS 10.

COGS 101A. Sensation and Perception (4)

An introduction to the experimental study of cognition with a focus on sensation and
perception. Prerequisites: COGS 1.

COGS 101B. Learning, Memory, and Attention (4)

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A survey of the experimental study of learning, memory, and attention. Topics include
conditioning, automaticity, divided attention, memory systems, and the nature of mental
representation. Prerequisites: COGS 1. Recommended: COGS 101A.

COGS 101C. Language (4)

An introduction to structure of natural language, and to the cognitive processes that
underline its acquisition, comprehension, and production. This course covers findings from
linguistics, computer science, psychology, and cognitive neuroscience to provide an
integrated perspective on human language abilities. Prerequisites: COGS 1 and 14A.

COGS 102A. Cognitive Perspectives (4)

Explores current theoretical frameworks of high-level human cognition that emphasize how
we interact with the material, social, and cultural world. Themes include the philosophy
and history of cognitive science, the role of artifacts, and how cognition extends beyond
the individual. Prerequisites: COGS 1 and COGS 10.

COGS 102B. Cognitive Ethnography (4)

Examines memory, reasoning, language, culture, planning, and interaction directly in
everyday, real-world settings. Focuses on ethnographic methods, their history, and their
application. The course work includes projects in which students make observations of
real-world activity and analyze their cognitive significance. Prerequisites: COGS 102A.

COGS 102C. Cognitive Design Studio (6)

This project-based course focuses on learning and applying the process of human-
centered cognitive design. Students work in teams to design and evaluate a prototype
application or redesign an existing system. Emphasizes contextual inquiry, user research,
ideation, iterative design, and evaluation. Prerequisites: COGS 102B.

COGS 107A. Neuroanatomy and Physiology (4)

This first course in the sequence focuses on principles of brain organization, from neurons
to circuits to functional networks. It explores developmental plasticity, neuronal
connectivity, cellular communication, complex signaling, and how these various
dimensions form functional brain systems. Prerequisites: BILD 12 or COGS 17.

COGS 107B. Systems Neuroscience (4)

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This course focuses on the electrical dynamics of neurons and how their patterns relate to
perception, thought, and action. Neural activity patterns underlying vision, touch, audition,
proprioception, and head orientation are examined in detail. Also examined are motor
control, sleep/wake state production, action planning, learning, memory, attention, spatial
cognition and function of the cerebellum, basal ganglia, and hippocampus. Prerequisites:
COGS 107A.

COGS 107C. Cognitive Neuroscience (4)

This course reviews research investigating the neural bases for human mental processes,
including processing of affective, social, linguistic, and visuospatial information, as well as
memory, attention, and executive functions. Also discussed are brain development and
brain aging, and the nature of intelligence and creativity. Prerequisites: COGS 107B and
its prerequisites.

COGS 108. Data Science in Practice (4)

Data science is multidisciplinary, covering computer science, statistics, cognitive science
and psychology, data visualization, artificial intelligence and machine learning, among
others. This course teaches critical skills needed to pursue a data science career using
hands-on programming and experimental challenges. Prerequisites: CSE 11 or CSE 8A or
COGS 18 or DSC 10 or MAE 8.

COGS 109. Modeling and Data Analysis (4)

Exposure to the basic computational methods useful throughout cognitive science.
Computing basic statistics, modeling learning individuals, evolving populations,
communicating agents, and corpus-based linguistics will be considered. Prerequisites:
COGS 14B, MATH 18 or MATH 31AH, and COGS 18 or CSE 7 or CSE 8A or CSE 11.

COGS 110. The Developing Mind (4)

(Cross-listed with HDS 121.) This course examines changes in thinking and perceiving the
physical and social world from birth through childhood. Evidence of significant changes in
encoding information, forming mental representations, and solving problems is culled from
psychological research, cross-cultural studies, and cognitive science. Cross-listed course.
HDS 121 has been renumbered from HDP 121. Students may receive credit for one of the
following: COGS 110, HDS 121, or HDP 121. Prerequisites: COGS 1 or HDP 1 or HDS 1.

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COGS 111. Beauty and the Brain (4)

What is beauty? The subjective experience of aesthetic appreciation dominates culture.
But what determines this illusive quality? Why is it so important, how did it evolve, and
how is it represented in the brain? Prerequisites: upper-division standing.

COGS 112. Humor (4)

In this course we will explore the psychology, philosophy, and evolutionary origins of
humor and laughter. Prerequisites: upper-division standing.

COGS 115. Neurological Development and Cognitive Change (4)

This course provides an overview of neurological development and explores the relations
between physiological change and the experience for the child from the prenatal period
through adolescence. Prerequisites: BILD 10 or BILD 12 or COGS 107A or COGS 107B or
COGS 17 or HDP 110.

COGS 116. Developmental Cognitive Neuroscience (4)

This course will discuss the relationship between brain and cognitive development. Topics
will include methods for studying the developing brain, how these methods have informed
our understanding of cognitive development, the effects of environmental factors, and
disorders of brain development. Prerequisites: COGS 107A and COGS 107B or PSYC
106.

COGS 118A. Supervised Machine Learning Algorithms (4)

This course introduces the mathematical formulations and algorithmic implementations of
the core supervised machine learning methods. Topics in 118A include regression, nearest
neighborhood, decision tree, support vector machine, and ensemble classifiers. COGS
118A-B may be taken in either order. Prerequisites: COGS 18 or CSE 8B or CSE 11 and
MATH 18 or MATH 31AH and MATH 20E and MATH 180A and COGS 108 or COGS 109 or
COGS 118B or CSE 150 or CSE 151 or CSE 158 or ECE 174 or ECE 175A.

COGS 118B. Introduction to Machine Learning (4)

This course, with COGS 118A, forms a rigorous introduction to machine learning. Topics in
118B include maximum likelihood estimation, Bayesian parameter estimation, clustering,
principal component analysis, and some application areas. COGS 118A-B may be taken in

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either order. Prerequisites: BILD 62 or COGS 18 or CSE 11 or CSE 8B or CSE 11 and

MATH 18 or MATH 31AH and MATH 20E and ECE 109 or ECON 120A or MAE 108 or
MATH 180A or MATH 183 or MATH 186 and COGS 108 or COGS 109 or COGS 118A or
COGS 188 or CSE 150A or CSE 151A or CSE 158 or CSE 158R or DSC 148 or ECE 174 or
ECE 175A.

COGS 118C. Neural Signal Processing (4)

This course will cover theoretical foundations and practical applications of signal
processing to neural data. Topics include EEG/field potential methods (filtering, Fourier
(spectral) analysis, coherence) and spike train analysis (reverse correlation, spike sorting,
multielectrode recordings). Some applications to neural imaging (optical microscopy, fMRI)
data will also be discussed. Prerequisites: MATH 18 or MATH 31AH, COGS 14B or PSYC
60, and COGS 108 or COGS 109.

COGS 118D. Mathematical Statistics for Behavioral Data Analysis (4)

Statistical methods for analyzing behavioral data. A mathematically sophisticated course
covering both classical and Bayesian statistical methods for estimation, hypothesis
testing, regression, and model comparison. Emphasis on both mathematical
understanding of statistical methods as well as common applications. Prerequisites:
MATH 18 or MATH 31AH and MATH 180A and COGS 108 or COGS 109, or consent of
instructor.

COGS 119. Programming for Experimental Research (4)

This course will help students in the behavioral sciences (cognitive science, psychology,
linguistics, neuroscience, and related fields) learn how to program experiments and
analyze and present data. Prerequisites: COGS 14B and MATH 18 or MATH 31AH and
MAE 8.

COGS 120. Interaction Design (5)

Introduces fundamental methods and principles for designing, implementing, and
evaluating user interfaces. Topics: user-centered design, rapid prototyping,
experimentation, direct manipulation, cognitive principles, visual design, social software,
software tools. Learn by doing: work with a team on a quarter-long design project.

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Recommended preparation: basic familiarity with HTML. Students may not receive credit
for both COGS 120 and CSE 170. Prerequisites: COGS 108 or CSE 12 or DSC 30 and
COGS 1 or COGS 10 or DSGN 1 or ENG 100D.

COGS 121. Human Computer Interaction Portfolio Design Studio (4)

Create a personal portfolio of web/mobile/product design projects, oral presentations, and
practice pitches to stakeholders. Prerequisites: COGS 120 or CSE 170 and COGS 18 or
CSE 8B or CSE 11 or DSC 30.

COGS 122. Start-up Studio (4)

Explores tools and processes for innovating novel business concepts to solve problems
involving the interaction between humans and technology. Students will work with an
interdisciplinary team to understand unmet user needs and to create a value proposition
that balances technical feasibility, financial viability, and desirability. Prerequisites: DSGN
100 or COGS 187B or COGS 187A or COGS 120 or CSE 170.

COGS 123. Social Computing (4)

This course explores the intersection of social behavior and computational systems.
Students will examine a range of organizational, technical, and business challenges related
to social computing, and learn how to use tools to analyze, design, and build online
communities. Prerequisites: COGS 102C or COGS 120 or COGS 187A or COGS 187B or
DSGN 1.

COGS 124. HCI Technical Systems Research (4)

In this advanced project-based course, we study the state-of-the-art in research on
technical systems for human-computer interaction (HCI). Students will deconstruct the
systems described in top-tier HCI papers and work in teams to create novel technical
systems of their own. Prerequisites: COGS 127 or COGS 121.

COGS 125. Advanced Interaction Design (4)

This is a studio class for students who are passionate about diving deep into interaction
design and honing their design skills. Introduces social computing, input and interaction
techniques, and information design. Students will regularly present work in a studio format.
Prerequisites: CSE 11 or 8B and COGS 120 or CSE 170.

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COGS 126. Thinking with Computers (4)

This course surveys the field of human-computer interaction and the ideas and
technologies that have shaped its development. Prerequisites: COGS 120 or COGS 121
or CSE 170.

COGS 127. Data-Driven UX/Product Design (4)

Create a UX/product design case study for your portfolio; team project with user research,
data science, prototyping, and user testing. Prerequisites: COGS 18 or CSE 11 or CSE
8B or DSC 30 and COGS 1 or COGS 187A or DSGN 1.

COGS 128. Information Visualization (4)

This course frames information visualization as a quintessential cognitive science problem
within our interdisciplinary field. Students learn conceptual and practical aspects of
creating high-quality, interactive information displays to support a variety of cognitive tasks
and then apply them to real-world data. Prerequisites: COGS 10 or DSGN 1 and COGS
108.

COGS 137. Practical Data Science in R (4)

Learn coding for data analysis using the R programming language. Course focus will be on
practical and applied skills in asking data-informed questions, data wrangling, data
visualization, building statistical learning models, and communicating your findings to
advance your career. Prerequisites: COGS 14B or MATH 11 or PSYC 60.

COGS 138. Neural Data Science (4)

Project-based course in which students will use computational notebooks to perform
exploratory data analyses and to test hypotheses in large neuroscience datasets, including
the differences between unique neuron types, leveraging text mining of the neuroscience
literature, and human neuroimaging analyses. Prerequisites: BILD 62 or COGS 18 or CSE
6R or CSE 8A and COGS 118C or COGS 189 or DSC 120 or ECE 45 or MATH 144.

COGS 142. Animal Communication (4)

This course introduces the study of animal communication, the key terminology, the
remarkable communicative systems that several animal species possess, and the key
similarities and differences between human and non-human animals’ communications.

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Prerequisites: COGS 14A.

COGS 143. Animal Cognition (4)

Examines the contrasts and parallels between primates and cetaceans in sensorimotor
constraints, neuroanatomy, field behavior, and cognition in the lab, with a focus on the
demands of competition and cooperation that helped shape the evolution of social
cognition. Students may not receive credit for COGS 143 and COGS 143GS.
Prerequisites: upper-division standing.

COGS 144. Social Cognition: A Developmental and Evolutionary Perspective (4)

This course presents the building blocks of social cognition from a developmental and
evolutionary perspective and focuses on how and when children develop these abilities
and how humans compare to other species such as great apes, birds, and dogs.
Prerequisites: COGS 14A-B.

COGS 150. Large Language Models and Cognitive Science (4)

This course will approach the topic of large language models (LLMs) from a cognitive
science perspective. Topics covered include the history of AI and cognitive science; basic
mechanics of LLMs; the emerging field of “LLM-ology”; philosophy of mind; how LLMs
can help inform research on human cognition; the role of sensorimotor grounding in
cognition and the development of multimodal LLMs; and the impacts of LLMs on human
culture and society more broadly. Recommended preparation: basic programming
experience, some exposure to topics in machine learning, and introductory concepts in
language. Prerequisites: COGS 14A and COGS 14B or MATH 11 or PSYC 60.

COGS 151. Analogy and Conceptual Systems (4)

Human thought and meaning are deeply tied to the capacity for mapping conceptual
domains onto each other, inducing common schemas and performing mental simulation.
This course examines major aspects of this cognitive activity including metaphor,
conceptual blending, and embodied cognition. Prerequisites: upper-division standing.

COGS 152. Cognitive Foundations of Mathematics (4)

How the human mind/brain creates mathematics: embodiment, innovation, and creativity.
The emergence and power of abstract concepts, such as infinity, infinitesimals, imaginary
numbers, or zero. Cognitive approaches that connect mathematics to human thought in

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general. Prerequisites: CHEM 96 or COGS 1 or MATH 95 or PHIL 1 or PSYC 1 or EDS

(20S or 30 or 31).

COGS 153. Language Comprehension (4)

The processes and representations involved in understanding language—processing
words, syntax, semantics, and discourse—are examined in light of evidence from both
psychological experiments and computer simulations. Prerequisites: upper-division
standing.

COGS 154. Communication Disorders in Children and Adults (4)

Neural bases of language use in normal adults, and neural bases of language and
communication development in normal children. Evidence on the language and
communication deficits in adults (especially aphasia and dementia) and children (specific
language impairment, focal brain injury, retardation, and autism). Prerequisites: upper-
division standing.

COGS 155. Gesture and Cognition (4)

Spontaneous gestures and their relationship to speech, cognition, brain, and culture. The
course covers, among others, gesture and language development, gesture and conceptual
systems, speech-gesture coproduction and its brain bases, evolution of language, and
gestural behavior in special populations. Prerequisites: upper-division standing.

COGS 156. Language Development (4)

A comprehensive survey of theory, method and research findings on language
development in children ranging from the earliest stages of speech perception and
communication at birth to refinements in narrative discourse and conventional fluency
through middle childhood and adolescence. Prerequisites: upper-division standing and
background in development psychology and/or linguistics is recommended.

COGS 157. Music and the Mind (4)

Explores how humans (and other species) process music, including pitch, meter, emotion,
motor aspects, links to language, brain activity. Students should have experience reading
musical notation. Prerequisites: COGS 101A or COGS 101B or COGS 101C.

COGS 160. Upper-Division Seminar on Special Topics (4)

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Special topics in cognitive science are discussed. (May be repeated when topics vary.)
Prerequisites: department approval.

COGS 163. Metabolic Disorders of the Brain (4)

Research is showing that cellular metabolic processes are mediating normal and abnormal
brain function. For example, neurocognitive disorders often co-occur with metabolic
disturbances, such as insulin resistance, diabetes, and obesity. An understanding of these
mechanisms will provide insight to new treatments for cognitive and neurological
disorders. The course will cover topics on the role of abnormal cellular structure, genetic,
epigenetic and pathogenic influences on synaptic signaling. Prerequisites: upper-division
standing.

COGS 164. Neurobiology of Motivation (4)

This course will address principles of motivation, valuation, and reward, spanning a large
territory of topics, from rules of synaptic learning to classroom learning. Recommended
preparation: courses in basic biology, physiology, COGS 107A or 107B or 107C, or
courses in education. Prerequisites: upper-division standing.

COGS 165. Neuroimaging of Cognition (4)

Introduction to functional magnetic resonance imaging (fMRI) methods for cognitive
neuroscience research. This course will cover basic aspects of the physics and biological
principles underlying MRI and fMRI, technical aspects of experimental design and data
collection for fMRI, as well as basic data processing and analysis approaches.
Prerequisites: COGS 107B or COGS 107C or PSYC 106 or PSYC 108.

COGS 169. Genetic Information for Behavior: From Single Cells to Mammals (4)
Behavior draws on a wide range of genes acting as a complex source of information.
Model organisms—bacteria, Paramecium, C. elegans, Drosophila, and mice—have
provided insight into how genes influence both innate and learned behaviors.
Prerequisites: COGS 1 and 107A or permission of instructor.

COGS 170. Brain Waves across Scales (4)

This course will provide an interactive and hands-on introduction to rhythms and large-
scale electrical potentials of the brain. Topics will include the resonance properties of
neurons, rhythmic interactions between neurons, the coordination of activity across large

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populations of neurons that is measurable in the local field potential (LFP) and
electroencephalogram (EEG), the advantages of temporally coordinated neural activity, and
relevant insights about the brain and cognitive disorders. Prerequisites: COGS 17 or BILD
12.

COGS 171. Mirror Neuron System (4)

This class will examine the neuroanatomy, physiology, and functional correlates of the
human mirror neuron system and its putative role in social cognition, e.g., action
understanding, empathy, and theory of mind. We will examine the developmental,
neuroimaging, electrophysiological, as well as clinical evidence, for and against this
hypothesis. Prerequisites: upper-division standing.

COGS 172. Brain Disorders and Cognition (4)

A review of the patterns of impaired and intact cognitive abilities present in brain-damaged
patients in terms of damage to one or more components of a model of normal cognitive
functioning. Prerequisites: COGS 107A.

COGS 174. Drugs: Brain, Mind, and Culture (4)

This course explores how drugs interact with the brain/mind and culture. It covers
evolutionary and historical perspectives, brain chemistry, pharmacology, expectancies and
placebo effects, and models of addiction. It also provides a biopsychosocial survey of
commonly used and abused substances. Prerequisites: upper-division standing.

COGS 175. The Neuropsychological Basis of Alternate States of Consciousness (4)

This course will review the literature that correlates brain rhythms in the human EEG with
aspects of cognition, behavioral states, neuropsycho-pharmacology, and psychopathology
in order to understand the psychological and neurophysiological underpinnings of these
experiences. Prerequisites: COGS 101A or COGS 107A.

COGS 176. From Sleep to Attention (4)

This course will combine an examination of the neural character of quiet and active sleep
states and their potential functions with an examination of the different mechanisms by
which the brain mediates attention to specific features of the world. Prerequisites: COGS
107A.

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COGS 177. Space and Time in the Brain (4)

The course examines features of neural dynamics that map spatial and temporal
relationships. Lectures will cover interval timing, mapping of item-to-observer position,
mapping of observer-to-world position, and the conjunction of spatial and temporal coding
in hippocampus. Prerequisites: upper-division standing.

COGS 178. Genes, Brains, and Behavior (4)

Evidence for genetic mediation of behavioral and neural differences, mechanisms that may
mediate these effects, and the roles of the environment and experience are discussed.
Prerequisites: COGS 107A-B or consent of instructor.

COGS 179. Electrophysiology of Cognition (4)

Survey the theory and practice of using electrical recordings (event-related brain
potentials) to study cognition and behavior including attention, language, mental
chronometry, memory, and plasticity. Prerequisites: COGS 107A or COGS 17.

COGS 180. Decision Making in the Brain (4)

This course covers recent advances in the understanding of neural mechanisms and
computational principles underlying the brain’s ability to make decisions. The role of
various factors, as well as their neural encoding, will be considered, e.g., observation
noise, reward, risk, internal uncertainty, emotional state, external incentives.
Prerequisites: BILD 12 or COGS 17 and COGS 108 or COGS 109 or CSE 150A and MATH
18 or MATH 20B or MATH 31AH.

COGS 181. Neural Networks and Deep Learning (4)

This course will cover the basics about neural networks, as well as recent developments in
deep learning including deep belief nets, convolutional neural networks, recurrent neural
networks, long-short term memory, and reinforcement learning. We will study details of the
deep learning architectures with a focus on learning end-to-end models for these tasks,
particularly image classification. Students may receive credit for one of the following:
COGS 181, CSE 151B, or CSE 154. Prerequisites: COGS 18 or CSE 11 or CSE 8B and
MATH 18 or MATH 31AH and MATH 20E and MATH 180A and COGS 118A or COGS 118B
or CSE 150 or CSE 151A or CSE 158 or ECE 174 or ECE 175A.

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COGS 182. Introduction to Reinforcement Learning (4)

This course is an introduction to reinforcement learning, the subfield of machine learning
concerned with how artificial agents learn to act in the world in order to maximize reward.
Topics include MDPs, policy iteration, TD learning, Q-learning, function approximation, and
deep RL. Prerequisites: COGS 18 or CSE 11 or CSE 8B and MATH 18 or MATH 31AH and
MATH 180A and COGS 108 or COGS 109 or COGS 118B or CSE 150A or CSE 150B or
CSE 151A or CSE 151B or CSE 158 or ECE 174 or ECE 175A.

COGS 184. Modeling the Evolution of Cognition (4)

This interdisciplinary course integrates data on evolutionary theory, hominid prehistory,
primate behavior, comparative neuroanatomy, cognitive development, and collaboration.
After lectures, readings, and discussion of the literature, students generate a detailed
timeline of five million years of human cognitive evolution. Students may not receive credit
for COGS 184 and COGS 184GS. Prerequisites: COGS 17 or COGS 107A or COGS 107B
or COGS 107C or BILD 12.

COGS 185. Advanced Machine Learning Methods (4)

This course is an advanced seminar and project course that follows the introduction to
machine learning courses. Advanced and new machine learning methods will be
discussed and used. Prerequisites: COGS 118A.

COGS 186. Genetic Algorithms (4)

This course will teach in detail some of the key biology-inspired AI algorithms. It will cover
genetic algorithms (GA), particle swarm optimization algorithms (PSO), and other
optimization algorithms like simulated annealing and gradient descent. Prerequisites:
COGS 108 or COGS 109.

COGS 187A. Usability and Information Architecture (4)

Examines the cognitive basis of successful web and multimedia design. Topics:
information architecture, navigation, usability, graphic layout, transaction design, and how
to understand user interaction. Prerequisites: COGS 18 or CSE 11 or CSE 8A and COGS
10 or DSGN 1.

COGS 187B. Practicum in Professional Web Design (4)

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This course follows up on the basics of multimedia design taught in COGS 187A. Students
will probe more deeply into selective topics, such as animation, navigation, graphical
display of information, and narrative coherence. Prerequisites: COGS 187A or consent of
instructor.

COGS 188. Artificial Intelligence Algorithms (4)

This class will cover a broad spectrum of machine learning algorithms. It builds on
students’ previous exposure to machine learning. It covers new artificial intelligence
algorithms ranging from topic models as used in the text data analysis to genetic
algorithms. Students will not receive credit for both COGS 188 and CSE 151A.
Prerequisites: COGS 109 or COGS 118A or COGS 118B.

COGS 189. Brain Computer Interfaces (4)

This course will discuss signal processing, pattern recognition algorithms, and human-
computer interaction issues in EEG-based brain-computer interfaces. Other types of brain-
computer interfaces will also be discussed. Prerequisites: COGS 108 or COGS 109 or
COGS 118A or COGS 118B.

COGS 190A. Pre-Honors Project in Cognitive Science (4)

This course prepares students for the Cognitive Science Honors Program. The aim is to
refine the research project and to teach students what a successfully written proposal
entails. Students may be admitted to the Honors Program contingent upon completion
and progress in the course. See “Cognitive Science Honors Program” section for more
information. Course should be taken for a letter grade. Prerequisites: upper-division
standing; instructor and department approval.

COGS 190B. Honors Studies in Cognitive Science (4)

This course will allow cognitive science honors students to explore advanced issues in the
field of cognitive science research. It will also provide the opportunity to develop a thesis
on the topic of their choice and begin work under faculty supervision. See “Cognitive
Science Honors Program” section for more information. Prerequisites: COGS 190A and
formal admittance to the Cognitive Science Honors Program; department stamp.

COGS 190C. Honors Thesis in Cognitive Science (4)

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This course will provide honors candidates an opportunity to complete the research on
and preparation of an honors thesis under close faculty supervision. Oral presentation of
student’s thesis is required to receive honors; additionally, student must receive grade of
A– or better in 190B and 190C to receive honors. See “Cognitive Science Honors
Program” section for more information. Prerequisites: COGS 190B with grade of A– or
better and formal admittance to the Cognitive Science Honors Program.

COGS 190D. Preparation for Thesis Presentation (1)

This course is affiliated with the honors program (190A-B-C) and is required of honors
students during spring quarter. Its aim is to prepare students to present research results to
an audience. Emphasis will be on the oral presentation (organization, wording, graphics),
but there will also be some discussion about written research reports. Seminar style format
with occasional short lectures wherein students will practice oral presentations and
provide constructive criticism to each other. Prerequisites: must be concurrently enrolled
in 190B or 190C.

COGS 193. Cognitive Science Career Seminar (2)

This course emphasizes career readiness, with a focus on practical training in professional
skills, networking, and career development. Students will be able to engage with
professionals in many domains to learn how their educational breadth provides them with
career advantages. Prerequisites: junior and senior standing.

COGS 195. Instructional Apprenticeship in Cognitive Science (4)

Students, under the direction of the instructor, lead laboratory or discussion sections,
attend lectures, and meet regularly with the instructor to help prepare course materials and
grade papers and exams. Applications must be submitted to and approved by the
department. P/NP grades only. May be taken for credit three times. Prerequisites: upper-
division standing; 3.0 GPA; instructor and department approval.

COGS 197. Cognitive Science Internship (2 or 4)

The student will undertake a program of practical research in a supervised work
environment. Topics to be researched may vary, but in each case the course will provide
skills for carrying out these studies. P/NP grades only. May be taken for credit up to three
times. Prerequisites: upper-division standing; 2.5 GPA; department approval.

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COGS 198. Directed Group Study (2 or 4)

This independent study course is for small groups of advanced students who wish to
complete a one-quarter reading or research project under the mentorship of a faculty
member. Students should contact faculty whose research interests them to discuss
possible projects. P/NP grades only. May be taken for credit three times. Prerequisites:
upper-division standing; 2.5 GPA; consent of instructor and department approval.

COGS 199. Special Project (2 or 4)

This independent study course is for individual, advanced students who wish to complete
a one-quarter reading or research project under the mentorship of a faculty member.
Students should contact faculty whose research interests them to discuss possible
projects. P/NP grades only. May be taken for credit three times. Prerequisites: upper-
division standing; 2.5 GPA; consent of instructor and department approval.

Graduate
COGS 200. Cognitive Science Seminar (4)
This seminar emphasizes the conceptual basis of cognitive science, including
representation, processing mechanisms, language, and the role of interaction among
individuals, culture, and the environment. Current developments in each field are
considered as they relate to issues in cognitive science. (May be repeated for credit.)

COGS 201. Neural Dynamics of Cognition (4)

Examination of the neurophysiological and neuroanatomical basis for perception,
cognition, and learning. Lectures will focus on the dynamics of neural activity in cortical
and subcortical structures as they relate to sensory processing, motor control, attention,
arousal state, and memory.

COGS 202. Computational Modeling of Cognition (4)

This course surveys some key methods of computational modeling across a range of
cognitive science fields. Bringing together basic tools of probabilistic modeling,
information theory, machine learning, and computational neuroscience. Students
presumed to be facile with probability, statistics, linear algebra, calculus.

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COGS 203. Cognitive Science Foundations: Theories and Methods in the Study of
Cognitive Phenomena (4)
Surveys a variety of theoretical and methodological approaches to the study of human
cognition. Topics include language structure, language processing, concepts and
categories, knowledge representation, analogy and metaphor, reasoning, planning and
action, problem solving, learning and expertise, and emotion.

COGS 205. Introduction to Thesis Research (4)

This course is taken to focus the students’ development of a thesis topic and research
proposal. Students prepare an outline of thesis proposal and make an oral public
presentation of the proposed topic prior to the end of the third year. S/U only.

COGS 209. Statistical Machine Learning for Social Sciences (4)

Advanced methods and fundamental principles for learning from data. Emphasis is on
foundational methods in supervised and unsupervised machine learning problems,
covering trade-offs inherent in model design, training, evaluation, selection, and validation.
Students will not receive credit for both COGS 209 and CSS 206. Recommended
preparation: introductory statistics and familiarity with scientific programming and analysis
software (MATLAB, Python, or R).Prerequisites: graduate standing.

COGS 210A-B-C. Introduction to Research (4-4-4)

This sequence is an intensive research project. Students under faculty mentorship perform
a thorough analysis of the problem and the literature, carry out original studies, and
prepare oral and written presentations. Students should aim for a report of publishable
quality. Letter grade required.

COGS 211A-B-C. Research Methods in Cognitive Science (2-2-2)

Issues in design, implementation, and evaluation of research in cognitive science are
discussed. Students will present and comment on their own research projects in progress.
Discussions also include presentations of research to various audiences, abstracts,
reviews, grant process, and scientific ethics. Letter grade required.

COGS 219. Programming for Behavioral Sciences (4)

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An applied hands-on programming course that focuses on the design, implementation,

and analysis of experiments. Topics include experiment design, stimulus presentation,
response collection, file manipulation, data analysis, display, and presentation. Course
work includes both team and individual projects. Graduate students who have not
programmed at all should speak with the professor beforehand.

COGS 220. Information Visualization (4)

This seminar surveys current research in information visualization with the goal of
preparing students to do original research. The focus is on the cognitive aspects of
information design, dynamic representations, and computational techniques. Topics vary
each time course is offered.

COGS 223. Collective Intelligence (4)

Collective intelligence is the study of how individuals coordinate, collaborate, and
deliberate to produce outcomes greater than any single agent can do alone. In this course,
students will explore different crowdsourcing platforms and mechanisms, read and discuss
foundational papers in the field, meet virtually with contemporary authors, and write a
novel research proposal that could lead to publication. Recommended preparation: COGS
230 is recommended, but not required. Prerequisites: graduate standing.

COGS 225. Image Recognition (4)

This course is designed to open the doors for students who are interested in learning
about the basic tools and technologies for image classification and recognition. We will
focus on traditional computer vision techniques as well as graphics processing unit (GPU)
powered deep learning techniques that are critical to modern image data analysis such as
large-scale image recognition, object detection, and video analysis.

COGS 229. Design at Large (1)

(Cross-listed with DSGN 219 and CSE 219.) New societal challenges, cultural values, and
technological opportunities are changing design, and vice versa. The seminar explores this
increased scale, real-world engagement, and disruptive impact. Invited speakers from UC
San Diego and beyond share cutting-edge research on interaction, design, and learning.
S/U grades only. May be taken for credit up to eighteen times. Students may receive a
combined total of eighteen units for COGS 229, CSE 219, and DSGN [Link]:
graduate standing.

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COGS 230. Topics in Human-Computer Interaction (4)

(Cross-listed with CSE 216.) Prepares students to conduct original HCI research by
reading and discussing seminal and cutting-edge research papers. Topics include design,
social software, input techniques, mobile, and ubiquitous computing. Student pairs
perform a quarter-long mini research project that leverages campus research efforts. Letter
grades only.

COGS 231. Design Seminar on Human-Centered Programming Tools (4)

Graduate-level seminar studying the design of programming tools from a human-centered
perspective, relying primarily on the latest research literature combined with classical
theory in cognitive science and human-computer interaction. Course work involves critical
reading, discussion, and programming projects. Letter grades only. Recommended
preparation: COGS 120 or CSE 170.

COGS 234. Foundations for Future User Interfaces (4)

This course will cover the fundamental elements of effective human-computer interaction
(HCI), including input modalities and techniques, representations, etc. In this course, the
student will take a deep dive into classic literature in HCI, and in doing so identify
fundamental problems that remain in today’s user interfaces as well as proposing and
developing exciting alternative user interface concepts.

COGS 238. Topics in Cognitive Linguistics (1–4)

(Cross-listed with LIGN 238.) Basic concepts, empirical findings, and recent developments
in cognitive and functional linguistics. Language viewed dynamically in relation to
conceptualization, discourse, meaning construction, and cognitive processing. (As topics
vary, may be repeated for credit.)

COGS 241. Ethics and Survival Skills in Academia (2)

(Cross-listed with NEU 241.) Lectures, readings, and discussions about the responsible
conduct and reporting of research, working with others in science, social responsibilities,
and various career advancement skills; the course is designed as an option for meeting
current federal regulations. S/U grades only.

COGS 243. Statistical Inference and Data Analysis (2 or 4)

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This course provides a rigorous treatment of hypothesis testing, statistical inference,

model fitting, and exploratory data analysis techniques used in the cognitive and neural
sciences. Students will acquire an understanding of mathematical foundations and hands-
on experience in applying these methods using MATLAB. Cognitive science PhD students
must enroll for four units and will be required to do assignments and a final project. All
other students can enroll for two units and will be required to complete all assignments but
not a final project (or by request a project and no assignments).

COGS 252. Cognitive Science of Mathematics (4)

Empirical investigation of the nature of mathematics. How the human mind/brain creates
abstract concepts, such as infinity, infinitesimals, imaginary numbers, or zero:
embodiment, creativity, and history. Cognitive approaches that connect mathematics to
human thought in general.

COGS 260. Seminar on Special Topics (1–4)

Specific topics in cognitive science are discussed. (May be repeated when topics vary.)

COGS 277. Mirroring in Social Cognition (4)

The discovery of mirror neurons in the monkey brain raised the possibility that “mirroring”
constitutes instances of mental simulation. In this seminar, we will examine the neural
basis of social cognition and specifically the relationship between mirroring processes and
cognition.

COGS 278. Genetics and Individuality (4)

Evidence for the heritability and for the association of genetic variants with behavioral and
neural phenotypes will be reviewed. Integrative models of gene-environment interaction
will be discussed. Guest faculty will describe their own work in this area.

COGS 279. Electrophysiology of Cognition (4)

(Cross-listed with NEU 279) This course surveys the theory and practice of using
recordings of electrical and magnetic activity of the brain to study cognition and behavior.
It explores what brain waves reveal about normal and abnormal perception, processing,
decision making, memory, preparation, and comprehension. Graduate students will be

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required to do additional readings for the material each week (different for each grad) and
to present orally (as well as in a written page) a critical analysis of the readings.
Prerequisites: COGS 107A or PSYC 106; COGS 101A or PSYC 105.

COGS 280. Neural Oscillations (4)

Brain rhythms play a critical role in perception and cognition. What are they? Where do
they come from? This course will examine the origin and function of neural oscillations and
the role they play in neural computation, representation, and cognition. Prerequisites:
department approval. Python/MATLAB experience required prior to enrollment.

COGS 281. Advanced Neural Signal Processing (4)

Mathematical foundations and applications of neural signal processing techniques used in
electrophysiology and neuroimaging (including microscopy), covering spectral analysis,
correlation, high-dimensional data, and spike-train analysis.

COGS 283. Big Visual Data Processing (4)

This course is designed for students interested in learning about basic tools and
technologies for dealing with big image data in the sense of collecting, crawling,
processing, and classifying images, focusing on matching, hashing, deep learning, and
online learning.

COGS 290. Cognitive Science Laboratory Rotation (2)

Laboratory rotations provide students with experience in the various experimental
methods used in cognitive science. Prerequisites: consent of instructor. S/U only.

COGS 291. Laboratory Research (1–4)

Students engage in discussions of reading of recent research in an area designated and
directed by the instructor and also participate in the design and execution of original
research. Students are expected to demonstrate oral and written competence in
presenting original research. Prerequisites: consent of the instructor and department
approval. (May be repeated for credit.)

COGS 298. Directed Independent Study (1–12)

Students study and research selected topics under the direction of a member of the
faculty.

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COGS 299. Thesis Research (1–12)

Students are provided directed research on their dissertation topic by faculty advisers.

COGS 500. Teaching Apprenticeship (1–4)

This practicum for graduate students provides experience in teaching undergraduate
cognitive science courses. S/U only.

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