Reverse Transcriptase PCR
(RT PCR)
Background
RT-PCR - one of many variants of
polymerase chain reaction.
This technique commonly used in
molecular biology to detect RNA
expression levels.
RT-PCR often confused with real-time
polymerase chain reaction (qPCR) by
students and scientists; they are
separate and distinct techniques.
Bit of history
the discovery of reverse transcriptase
(enzyme) during the study of viral replication
of genetic material led to the development of
RT-PCR.
RT-PCR displaced Northern blot as the method
of choice for RNA detection and quantification.
RT-PCR has risen to become the benchmark
technology for the detection and/or
comparison of RNA levels.
Principles of RT-PCR
the RNA template is first converted
into a complimentary DNA (cDNA)
using a reverse transcriptase.
The cDNA is then used as a template
for exponential amplification using
PCR.
Principles of RT-PCR
One step Vs Two step RT-
PCR
The quantification of mRNA using RT-
PCR can be achieved as either a one-
step or a two-step reaction.
In the one-step approach, the entire
reaction from cDNA synthesis to PCR
amplification occurs in a single tube.
The two-step reaction requires that the
reverse transcriptase reaction and PCR
amplification performed in separate
tubes.