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ISBN-10
1938168097
ISBN-13
978-1-938168-09-3
Revision
BM-1-001-DW
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Table of Contents
Preface to Biology . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Unit 1. The Chemistry of Life
Chapter 1: The Study of Life . . . . . . . . . . . . . . . . . . . . . . . . .
1.1 The Science of Biology . . . . . . . . . . . . . . . . . . . . . . . .
1.2 Themes and Concepts of Biology . . . . . . . . . . . . . . . . . . .
Chapter 2: The Chemical Foundation of Life . . . . . . . . . . . . . . . . .
2.1 Atoms, Isotopes, Ions, and Molecules: The Building Blocks . . . . .
2.2 Water . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
2.3 Carbon . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Chapter 3: Biological Macromolecules . . . . . . . . . . . . . . . . . . . .
3.1 Synthesis of Biological Macromolecules . . . . . . . . . . . . . . .
3.2 Carbohydrates . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
3.3 Lipids . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
3.4 Proteins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
3.5 Nucleic Acids . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Unit 2. The Cell
Chapter 4: Cell Structure . . . . . . . . . . . . . . . . . . . . . . . . . . .
4.1 Studying Cells . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
4.2 Prokaryotic Cells . . . . . . . . . . . . . . . . . . . . . . . . . . .
4.3 Eukaryotic Cells . . . . . . . . . . . . . . . . . . . . . . . . . . . .
4.4 The Endomembrane System and Proteins . . . . . . . . . . . . . .
4.5 The Cytoskeleton . . . . . . . . . . . . . . . . . . . . . . . . . . .
4.6 Connections between Cells and Cellular Activities . . . . . . . . . .
Chapter 5: Structure and Function of Plasma Membranes . . . . . . . . .
5.1 Components and Structure . . . . . . . . . . . . . . . . . . . . . .
5.2 Passive Transport . . . . . . . . . . . . . . . . . . . . . . . . . . .
5.3 Active Transport . . . . . . . . . . . . . . . . . . . . . . . . . . . .
5.4 Bulk Transport . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Chapter 6: Metabolism . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
6.1 Energy and Metabolism . . . . . . . . . . . . . . . . . . . . . . . .
6.2 Potential, Kinetic, Free, and Activation Energy . . . . . . . . . . . .
6.3 The Laws of Thermodynamics . . . . . . . . . . . . . . . . . . . .
6.4 ATP: Adenosine Triphosphate . . . . . . . . . . . . . . . . . . . . .
6.5 Enzymes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Chapter 7: Cellular Respiration . . . . . . . . . . . . . . . . . . . . . . . .
7.1 Energy in Living Systems . . . . . . . . . . . . . . . . . . . . . . .
7.2 Glycolysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
7.3 Oxidation of Pyruvate and the Citric Acid Cycle . . . . . . . . . . . .
7.4 Oxidative Phosphorylation . . . . . . . . . . . . . . . . . . . . . .
7.5 Metabolism without Oxygen . . . . . . . . . . . . . . . . . . . . . .
7.6 Connections of Carbohydrate, Protein, and Lipid Metabolic Pathways
7.7 Regulation of Cellular Respiration . . . . . . . . . . . . . . . . . . .
Chapter 8: Photosynthesis . . . . . . . . . . . . . . . . . . . . . . . . . .
8.1 Overview of Photosynthesis . . . . . . . . . . . . . . . . . . . . . .
8.2 The Light-Dependent Reactions of Photosynthesis . . . . . . . . . .
8.3 Using Light Energy to Make Organic Molecules . . . . . . . . . . .
Chapter 9: Cell Communication . . . . . . . . . . . . . . . . . . . . . . . .
9.1 Signaling Molecules and Cellular Receptors . . . . . . . . . . . . .
9.2 Propagation of the Signal . . . . . . . . . . . . . . . . . . . . . . .
9.3 Response to the Signal . . . . . . . . . . . . . . . . . . . . . . . .
9.4 Signaling in Single-Celled Organisms . . . . . . . . . . . . . . . . .
Chapter 10: Cell Reproduction . . . . . . . . . . . . . . . . . . . . . . . .
10.1 Cell Division . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
10.2 The Cell Cycle . . . . . . . . . . . . . . . . . . . . . . . . . . . .
10.3 Control of the Cell Cycle . . . . . . . . . . . . . . . . . . . . . . .
10.4 Cancer and the Cell Cycle . . . . . . . . . . . . . . . . . . . . . .
10.5 Prokaryotic Cell Division . . . . . . . . . . . . . . . . . . . . . . .
Unit 3. Genetics
Chapter 11: Meiosis and Sexual Reproduction . . . . . . . . . . . . . . .
11.1 The Process of Meiosis . . . . . . . . . . . . . . . . . . . . . . .
11.2 Sexual Reproduction . . . . . . . . . . . . . . . . . . . . . . . . .
. . 8
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477
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486
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501
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527
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633
641
642
648
656
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673
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680
682
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699
699
705
709
716
727
728
732
738
740
751
751
755
763
778
789
797
798
802
806
811
817
821
824
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839
840
842
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853
861
868
883
883
887
891
901
901
911
922
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933
934
939
950
959
960
970
976
982
989
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. 989
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1008
1014
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1031
1031
1036
1040
1044
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1063
1063
1066
1069
1078
1080
1093
1094
1104
1110
1118
1135
1136
1142
1147
1153
1163
1164
1167
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1179
1189
1190
1193
1199
1201
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1334
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1407
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1427
1458
PREFACE TO BIOLOGY
PREFACE TO BIOLOGY
Welcome to Biology, an OpenStax College resource. This textbook has been created with several goals
in mind: accessibility, customization, and student engagementall while encouraging science students
toward high levels of academic scholarship. Instructors and students alike will find that this textbook
offers a strong foundation in biology in an accessible format.
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Biology can be easily customized using our online platform. Simply select the content most relevant
to your current semester and create a textbook that speaks directly to the needs of your class. Biology is
organized as a collection of sections that can be rearranged, modified, and enhanced through localized
examples or to incorporate a specific theme of your course. This customization feature will help bring
biology to life for your students and will ensure that your textbook truly reflects the goals of your course.
Curation
To broaden access and encourage community curation, Biology is open source licensed under a
Creative Commons Attribution (CC-BY) license. The scientific community is invited to submit
examples, emerging research, and other feedback to enhance and strengthen the material and keep
it current and relevant for todays students. Submit your suggestions to info@[Link],
and check in on edition status, alternate versions, errata, and news on the StaxDash at
[Link]
Cost
Our textbooks are available for free online, and in low-cost print and e-book editions.
About Biology
Biology is designed for multi-semester biology courses for science majors. It is grounded on an
evolutionary basis and includes exciting features that highlight careers in the biological sciences and
everyday applications of the concepts at hand. To meet the needs of todays instructors and students,
some content has been strategically condensed while maintaining the overall scope and coverage of
traditional texts for this course. Instructors can customize the book, adapting it to the approach that works
PREFACE TO BIOLOGY
best in their classroom. Biology also includes an innovative art program that incorporates critical thinking
and clicker questions to help students understandand applykey concepts.
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PREFACE TO BIOLOGY
Everyday Connection features tie biological concepts to emerging issues and discuss science in
terms of everyday life. Topics include Chesapeake Bay and Can Snail Venom Be Used as a
Pharmacological Pain Killer?
Senior Contributors
Yael Avissar
Cell Biology
Jung Choi
Genetics
Jean DeSaix
Animal Physiology
Robert Wise
Plant Biology
Connie Rye
Aurora University
Summer Allen
Brown University
James Bader
David Bailey
Mark Belk
Nancy Boury
Lisa Bonneau
Purdue University
Sue Chaplin
George Cline
Deb Cook
Diane Day
Frank Dirrigl
Waneene Dorsey
Nick Downey
Rick Duhrkopf
Baylor University
Kristy Duran
Stan Eisen
PREFACE TO BIOLOGY
Brent Ewers
University of Wyoming
Myriam Feldman
Michael Fine
Linda Flora
Thomas Freeland
Walsh University
David Gris
Andrea Hazard
SUNY Cortland
Michael Hedrick
Linda Hensel
Mercer University
Mark Kopeny
University of Virginia
Norman Johnson
Grace Lasker
Sandy Latourelle
SUNY Plattsburgh
Theo Light
Shippensburg University
Clark Lindgren
Grinnell College
James Malcolm
University of Redlands
Mark Meade
Richard Merritt
James Mickle
Jasleen Mishra
Dudley Moon
Jonas Okeagu
Diana Oliveras
John Peters
College of Charleston
Joel Piperberg
Millersville University
Johanna Porter-Kelley
Robyn Puffenbarger
Bridgewater College
Dennis Revie
Ann Rushing
Baylor University
Sangha Saha
Edward Saiff
Brian Shmaefsky
Robert Sizemore
Marc Smith
Frederick Spiegel
University of Arkansas
Frederick Sproull
La Roche College
Bob Sullivan
Marist College
Mark Sutherland
Hendrix College
Toure Thompson
Scott Thomson
University of Melbourne
Mary White
Steven Wilt
Bellarmine University
James Wise
Hampton University
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PREFACE TO BIOLOGY
Virginia Young
Mercer University
Leslie Zeman
University of Washington
Daniel Zurek
Learning Resources
Wiley Plus for Biology-Fall 2013 Pilot
WileyPLUS
([Link] provides an engaging online environment for effective teaching and learning.
WileyPLUS builds students confidence because it takes the guesswork out of studying by
providing a clear roadmap; what to do, how to do it, and if they did it right. With WileyPLUS,
students take more initiative. Therefore, the course has a greater impact on their learning
experience. Adaptive tools provide students with a personal, adaptive learning experience so they
can build their proficiency on topics and use their study time most effectively. Please let us know if
you would like to participate in a Fall 2013 Pilot.
Biology Powerpoint Slides (faculty only)
The
PowerPoint
slides
([Link]
biology#biology_powerpoint_slides) are based on the extensive illustrations from Biology. They
can be edited, incorporated into lecture notes, and you are free to share with anyone in the
community. This is a restricted item requiring faculty registration. NOTE: This file is very large
and may take some time to download.
SimBio (Laboratory)
SimBios interactive modules ([Link] (virtual labs and interactive tutorials and
chapters) provide engaging, discovery-based learning tools that complement many of the chapters
of Biology. SimBio is best known for their EcoBeaker and EvoBeaker suites of simulated
ecology and evolution laboratories that guide students through the discovery of important
concepts via a mix of structured and open-ended experimentation on simulated systems. In response
to popular demand, SimBio has begun applying the same powerful approaches to topics in cell
biology, genetics, and neurobiology. All of SimBios modules include instant-feedback questions
that enhance student comprehension and auto-graded questions that facilitate implementation.
1 | THE STUDY OF
LIFE
Figure 1.1 This NASA image is a composite of several satellite-based views of Earth. To make the
whole-Earth image, NASA scientists combine observations of different parts of the planet. (credit:
NASA/GSFC/NOAA/USGS)
Chapter Outline
1.1: The Science of Biology
1.2: Themes and Concepts of Biology
Introduction
Viewed from space, Earth offers no clues about the diversity of life forms that reside there. The first
forms of life on Earth are thought to have been microorganisms that existed for billions of years in the
ocean before plants and animals appeared. The mammals, birds, and flowers so familiar to us are all
relatively recent, originating 130 to 200 million years ago. Humans have inhabited this planet for only
the last 2.5 million years, and only in the last 200,000 years have humans started looking like we do
today.
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(b)
(a)
Figure 1.2 Formerly called blue-green algae, these (a) cyanobacteria, shown here at 300x
magnification under a light microscope, are some of Earths oldest life forms. These (b) stromatolites
along the shores of Lake Thetis in Western Australia are ancient structures formed by the layering
of cyanobacteria in shallow waters. (credit a: modification of work by NASA; credit b: modification of
work by Ruth Ellison; scale-bar data from Matt Russell)
What is biology? In simple terms, biology is the study of living organisms and their interactions with
one another and their environments. This is a very broad definition because the scope of biology is vast.
Biologists may study anything from the microscopic or submicroscopic view of a cell to ecosystems
and the whole living planet (Figure 1.2). Listening to the daily news, you will quickly realize how
many aspects of biology are discussed every day. For example, recent news topics include Escherichia
coli (Figure 1.3) outbreaks in spinach and Salmonella contamination in peanut butter. Other subjects
include efforts toward finding a cure for AIDS, Alzheimers disease, and cancer. On a global scale,
many researchers are committed to finding ways to protect the planet, solve environmental issues, and
reduce the effects of climate change. All of these diverse endeavors are related to different facets of the
discipline of biology.
Figure 1.3 Escherichia coli (E. coli) bacteria, seen in this scanning electron micrograph, are
normal residents of our digestive tracts that aid in the absorption of vitamin K and other nutrients.
However, virulent strains are sometimes responsible for disease outbreaks. (credit: Eric Erbe, digital
colorization by Christopher Pooley, both of USDA, ARS, EMU)
the scientific method to disciplines such as physics and chemistry, but when it comes to disciplines like
archaeology, psychology, and geology, the scientific method becomes less applicable as it becomes more
difficult to repeat experiments.
These areas of study are still sciences, however. Consider archeologyeven though one cannot
perform repeatable experiments, hypotheses may still be supported. For instance, an archeologist can
hypothesize that an ancient culture existed based on finding a piece of pottery. Further hypotheses could
be made about various characteristics of this culture, and these hypotheses may be found to be correct
or false through continued support or contradictions from other findings. A hypothesis may become a
verified theory. A theory is a tested and confirmed explanation for observations or phenomena. Science
may be better defined as fields of study that attempt to comprehend the nature of the universe.
Natural Sciences
What would you expect to see in a museum of natural sciences? Frogs? Plants? Dinosaur skeletons?
Exhibits about how the brain functions? A planetarium? Gems and minerals? Or, maybe all of the above?
Science includes such diverse fields as astronomy, biology, computer sciences, geology, logic, physics,
chemistry, and mathematics (Figure 1.4). However, those fields of science related to the physical world
and its phenomena and processes are considered natural sciences. Thus, a museum of natural sciences
might contain any of the items listed above.
Figure 1.4 The diversity of scientific fields includes astronomy, biology, computer science, geology,
logic, physics, chemistry, mathematics, and many other fields. (credit: Image Editor/Flickr)
There is no complete agreement when it comes to defining what the natural sciences include,
however. For some experts, the natural sciences are astronomy, biology, chemistry, earth science, and
physics. Other scholars choose to divide natural sciences into life sciences, which study living things and
include biology, and physical sciences, which study nonliving matter and include astronomy, geology,
physics, and chemistry. Some disciplines such as biophysics and biochemistry build on both life and
physical sciences and are interdisciplinary. Natural sciences are sometimes referred to as hard science
because they rely on the use of quantitative data; social sciences that study society and human behavior
are more likely to use qualitative assessments to drive investigations and findings.
Not surprisingly, the natural science of biology has many branches or subdisciplines. Cell biologists
study cell structure and function, while biologists who study anatomy investigate the structure of an
entire organism. Those biologists studying physiology, however, focus on the internal functioning of an
organism. Some areas of biology focus on only particular types of living things. For example, botanists
explore plants, while zoologists specialize in animals.
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