Chapter 7
Chapter 7
7 Bioenergetics
Chapter 4 described the structure of cell and chapter 6 mentioned the role of enzymes in cellular
functions. A living cell exhibits ceaseless chemical activities.
We studied that cells are like “open systems” i.e. substances are entering and leaving the cell all the
times. Inside cells, substances are broken down and new substances are formed. Energy drives all
these processes in a cell. In living organisms, energy exists in two forms: kinetic energy is actively
involved in doing work, and potential energy is stored for future use. Potential energy is stored in
chemical bonds and is released as kinetic energy when these bonds break.
Bioenergetics is the study of energy relationships and energy transformations (conversions) in living
organisms. Organisms obtain energy by metabolizing the food they eat or prepare. Food contains
potential energy in its bonds. When these bonds are broken down, a large amount of kinetic energy
is usually released. Some of this energy is stored in the form of potential energy in the bonds of ATP
molecules while the rest escapes as heat. The potential energy stored in ATP is again transformed
into kinetic energy to carry out life activities (Fig 7.1).
Recalling
Plants and some microorganisms (e.g. photosynthetic bacteria and algae) prepare their
own food from carbon dioxide and water in the presence of light by a process called
photosynthesis. Whereas animals, fungi and many microorganisms (non-photosynthetic
bacteria and protozoans) get the prepared food.
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Animation 7.2 : Bioenergetic
Source and Credit: introbiol
Oxidation-Reduction Reaction
Various life processes in organisms involve constant flow of energy. This energy flow comprises the
acquisition, transformation and use of energy for various life processes like growth, movement,
reproduction etc.
For all life processes, oxidation-reduction reactions (redox reactions) are the direct source of
energy. Redox reactions involve exchange of electrons between atoms. The loss of electrons is
called oxidation while the gain of electrons is called reduction.
Electrons can be an energy source. It depends upon their location and arrangement in atoms. For
example; when they are present in oxygen, they make stable association with oxygen atom and
are not good energy source. But if electrons are dragged away from oxygen and attached to some
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other atom e.g. carbon or hydrogen, they make unstable association. They try to move back to
oxygen and when this happens, energy is released.
In living organisms redox reactions involve the loss and gain of hydrogen atoms. We know that
a hydrogen atom contains one proton and one electron. It means that when a molecule loses
a hydrogen atom, it actually loses an electron (oxidation) and similarly when a molecule gains
hydrogen atom, it actually gains an electron (reduction).
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The ability of ATP to store and release energy is due to its molecular structure. Figure 7.3 shows
a simplified diagram of ATP. Each ATP molecule has three subunits: (a) adenine - a double-ringed
nitrogenous base; (b) a ribose - a five-carbon sugar; and (c) three phosphate groups in a linear
chain.
The ability of ATP to store and release energy is due to its molecular structure. Figure 7.3 shows
a simplified diagram of ATP. Each ATP molecule has three subunits: (a) adenine a double-ringed
nitrogenous base; (b) a ribose - a five-carbon sugar; and (c) three phosphate groups in a linear
chain.
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The covalent bond connecting two phosphates is indicated by the “tilde” (~) and it is a high-energy
bond. The energy in this bond is released
as it breaks and inorganic phosphate (Pi)
gets separated from ATP. The breaking of
one phosphate bond releases about 7.3
kcal (7,300 calories) per mole of ATP as
follows:
ATP + H2O g ADP + Pi + energy (7.3
kcal/mole)
7.2 Photosynthesis
Photosynthesis is the synthesis of glucose from carbon dioxide and water in the presence of sunlight
and chlorophyll, with oxygen as a by-product. Photosynthesis is an anabolic (building) process and
is an important component of bioenergetics in living systems.
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It is the most important biochemical pathway and nearly all life depends on it. It comprises many
coordinated biochemical reactions that occur in plants, some protists (algae), and some bacteria. A
simple general equation for photosynthesis is as follows:
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Animation 7.4 : Photosynthesis
Source and Credit: mocomi
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Intake of Water and Carbon dioxide
Water and carbon dioxide are the raw materials of photosynthesis. Plants have mechanisms for
the intake and transport of these raw materials.
Water, present in soil, is absorbed by roots and root hairs through osmosis. This water is eventually
transported to leaves through xylem vessels.
The air that enters leaf through tiny pores (stomata) reaches into the air spaces present around
mesophyll cells. This air carries CO 2 , which gets absorbed in the thin layer of water surrounding
mesophyll cells. From here, the carbon dioxide diffuses into mesophyll cells.
Recalling
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Animation 7.6 : Photosynthesis
Source and Credit: [Link]
Photosynthesis occurs in two phases (Fig 7.4). During first phase, light energy is captured and is
used to make high-energy molecules (ATP and NADPH). These reactions, which are known as light
reactions, take place on the thylakoid membranes of chloroplasts. During second phase, carbon
dioxide is reduced to make glucose. In this phase, the energy from high energy molecules (ATP and
NADPH) is utilized. Since these reactions do not use light directly, they are known as dark reactions.
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The dark reactions take place in the stroma of the chloroplasts.
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Light Reactions
The summary of the events of light reactions is as follows;
• When chlorophyll molecules absorb light, their energy level increases and their electrons are
emitted.
• Electrons are passed to electron transport chain to produce ATP.
• Light also breaks water molecule (photolysis) and oxygen is released. The hydrogen atoms of
water give electrons to chlorophyll and become ions.
• The electrons of chlorophyll, after the production of ATP, and the hydrogen ions of water are
used for the reduction of NADP+ into NADPH.
The whole series of light reactions is called Z-scheme due to its Z-shaped flow chart.
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Animation 7.8 : Photosynthesis Light Reaction
Source and Credit: makeagif
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• CO2 molecules are combined with 5-carbon compounds to form 2 temporary 6-carbon
compounds, each of which splits into two 3- carbon compounds.
• The 3-carbon compounds are reduced to 3-carbon carbohydrates by using ATP and hydrogen
from NADPH. The 3-carbon carbohydrates are used to manufacture glucose.
• The 3-carbon carbohydrates are also used to regenerate the original 5-carbon compounds. This
step also utilizes ATP.
Sunlight energy is absorbed by chlorophyll. It is then converted into chemical energy, which drives the
photosynthetic process. Only about one percent of the light falling on the leaf surface is absorbed,
the rest is reflected or transmitted. The light rays of different wavelengths are not only differently
absorbed by photosynthetic pigments but are also differently effective in photosynthesis. The blue
and red lights carry out more photosynthesis.
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Any environmental factor the absence or deficiency of which can decrease the rate of a metabolic
reaction, is called limiting factor for that reaction. Many factors like light intensity, temperature,
concentration of carbon dioxide and availability of water act as limiting factors for photosynthesis.
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Practical Work:
Demonstration of photosynthesis
The phenomenon of photosynthesis can be demonstrated by using an aquatic plant, like HydriIla.
You know that in the process of photosynthesis, oxygen gas is evolved as a [Link] release
of oxygen from a set up would provide an evidence of photosynthesis.
Problem:
Does Hydrilla carry out photosynthesis when provided by all the essential factors?
Hypothesis:
Hydrilla is an aquatic plant that carries out photosynthesis, using CO2 and water and releases
oxygen at the same time.
Deduction:
Release of O2 from the plant body would be a proof of photosynthesis.
Material required:
Fresh Hydrilla branches, 500 ml beaker, funnel, test tube, potassium bicarbonate, match box,
water tub.
Background information:
Carbon dioxide and water are the raw materials for photosynthesis. When potassium bicarbonate
is dissolved in water, it is ionized into carbonate and hydrogen ions. The carbonate ions release
carbon dioxide.
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Procedure:
1. Fill about half of the 500-ml beaker with water.
2. Take some fresh branches of Hydrilla and place them in the broader side of a funnel and set
the funnel as shown in Fig 7.7.
3. Put an inverted test tube on the tubular part of the funnel. (Perform step 1, 2 and 3 by putting
all the apparatus in a water tub, so that no external air would enter the test tube. After step 3,
bring the set-up out of water tub.)
4. Put some quantity of potassium bicarbonate in the water of beaker.
5. Put all the set up in light and observe.
Observation:
Bubbles would be created in test tube water and these
will accumulate in the top portion of the tube.
Results: T
he branches have released oxygen gas in the form of
bubbles.
Confirmation:
When enough gas bubbles have accumulated in the
test tube, pick up the tube by putting thumb on its
mouth. Take a burning match-stick inside the tube. It
flares up when it touches gas bubbles. It confirms that
the test tube contains oxygen gas.
Error analysis:
The experimental work would not give the expected
results if any of the limiting factors of photosynthesis
i.e. light, CO2 , water, and chlorophyll are not present.
Similarly, if gas bubbles are not observed the branches
used may be dead and decayed.
Evaluation:
1. There are two phases of photosynthesis i.e. light Figure 7.7: Experiment set up for the demonstration of
reactions and dark [Link] which of photosynthesis
these phases oxygen is produced?
2. Why was it necessary to do experiment with fresh
branches of Hydrilla?
3. Why did you use a burning match-stick for confirmatory test?
4. What products (other than oxygen) are produced during photosynthesis?
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Practical Work:
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Observation:
Leaf will turn blue-black.
Results:
Leaf contains starch.
Error analysis:
If leaf is retained in boiling water for long, it
breaks the starch molecules present in it. Such
a leaf will not give the expected results of the
starch test.
Evaluation:
i. From where did the leaf get starch?
ii. Why was leaf placed in ethanol?
iii. What was the purpose of washing the leaf
before performing the starch test?
Practical Work:
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Background information:
• Some leaves have yellow areas on their green surface. These areas mark the absence of
chlorophyll (chloroplasts) containing cells. Such spotted leaves are called variegated leaves.
• Occurrence of photosynthesis can be confirmed by the presence of starch, through starch test.
Procedure:
1. Take a potted plant with variegated leaves e.g. Geranium.
2. Put the potted plant in light for several days so that it carries out photosynthesis (Fig 7.9).
3. Detach one of the variegated leaves and draw its upper surface on paper. The drawing should
clearly distinguish the green and non-green areas.
4. Perform starch test on whole leaf.
Observation:
The green parts of leaf will turn blue-black while the non-green parts will remain colourless.
Results:
There is no starch present in the non-green parts of leaf. In other words, these nongreen parts do
not carry out photosynthesis.
Error analysis:
If non-green as well as green parts of leaf do not show the presence of starch, it means that the
potted plant did not get any of the other required variables e.g. light, CO2 , water etc.
Evaluation:
1. If there is no photosynthesis in the non-green parts of leaf, how they are alive?
2. In which phase of photosynthesis, chlorophyll plays its role?
3. Chlorophyll-a is the principal pigment. What are the accessory pigments?
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Practical Work:
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Error analysis:
If the covered parts show the presence of starch, it means that the plant could not be de-starched
while it was kept in darkness. It may be due to the reason that plant was not given enough time to
consume its stored starch.
Evaluation:
1. If light is necessary for photosynthesis, why the other parts of the plant do not photosynthesize,
which receive light?
2. What adaptations leaves possess for maximum absorption of light?
3. Which colours of light are least absorbed by the leaves?
Practical Work:
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Apparatus required:
A potted plant with healthy leaves, a 500 ml beaker, a forceps, a test tube, ethanol, dilute iodine
solution, dropper, petri dish, potassium hydroxide solution, a glass flask with rubber cork.
Background information:
• If a plant is kept in darkness for several days, it utilizes its stored starch and is said to be de-
starched.
• Potassium hydroxide absorbs CO2 from its surroundings.
• Occurrence of photosynthesis can be confirmed by the presence of starch, through starch test.
Procedure:
1. Take a potted plant and keep it in darkness for at least three days so that its leaves are de-
starched.
2. Take potassium hydroxide solution in a glass flask and fit a cork in the mouth of the flask. The
cork should be cut longitudinally
before fitting.
3. Select a leaf of the de-starched plant (but do not remove it from plant). Pass half of the leaf
from the cut of cork so that half portion of leaf is inside flask and other half is outside (Fig
7.11).
4. Put the potted plant in a well-lit place for at least five hours.
5. Remove the experimental leaf and perform starch test to observe the presence and/or
absence of starch. Make a drawing to show the results.
Observation:
The portion of leaf present inside flask will remain colourless while the other portion that remains
in fresh air will turn blue-black.
Results:
Carbon dioxide present in the air inside flask was absorbed by KOH and so the portion of leaf
present here could not carry out photosynthesis and could not make starch.
Error analysis:
If the portion of leaf inside flask shows the presence of starch, it means that the cut in the rubber
cork was wide to allow some air to enter the flask.
Evaluation:
1. Why the portion inside the flask could not make starch?
2. Where had the CO2 gone that was present in the air inside flask?
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7.3 Respiration
When we burn a fuel, it utilizes oxygen and yields energy in the form of light, heat, etc. In this
burning process, oxygen is used to break the C-H bonds present in fuel molecules. In the same way,
organisms utilize oxygen for the breakdown of C-H bonds present in the food in their cells. This
break down yields energy which is transformed into ATP. During this process the C-H bonds are
broken by oxidation-reduction reaction and so carbon dioxide and water are also produced. The
cellular energy-yielding process is called cellular respiration.
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In cellular respiration, food is oxidized to CO2 while O2 is reduced into H2O.
The most common fuel used by cell to get energy by cellular resp ration is glucose. The way glucose
is oxidized depends on the availability of oxygen. The cellular respiration occurring in the presence
of oxygen is called aerobic respiration while the one that occurs in the absence of oxygen is called
anaerobic respiration.
i. Aerobic Respiration
In the presence of oxygen, complete oxidation of glucose occurs with maximum release of energy.
In the first phase of aerobic respiration, a molecule of glucose (6-C) is broken down into two
molecules of pyruvic acid (3-C).
In the second phase, molecules of pyruvic acid are completely oxidized (all C-H bonds are broken)
to CO2 and water and all energy is [Link] overall reaction is as follows.
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It is transformed into ethyl alcohol or lactic acid. In this way many of the C-H bonds are left
unbroken in the products. Anaerobic respiration is further classified as alcoholic fermentation
and lactic acid fermentation.
A- Alcoholic fermentation:
It occurs in bacteria, yeast etc. In this type of anaerobic respiration, pyruvic acid is further broken
down into alcohol (C2H5 OH) and CO2 .
Importance of Fermentation
When life evolved on the Earth, the early land or water habitats did not have any supply of
free oxygen (O2). In these anaerobic conditions, early organisms respired anaerobically and
got energy for their life activities. Even today when free oxygen is available, some organisms
including some bacteria and some fungi get energy from anaerobic respiration and are called
anaerobes. Humans can also provide energy to their skeletal muscle cells through anaerobic
respiration. It happens when skeletal muscles have to work hard (during exercise etc.) but
oxygen supply cannot be increased to fulfil the demand.
Scientists have used the fermenting abilities of fungi and bacteria for the benefit of mankind.
For example, the fermenting powers of bacteria are used for making cheese and yogurt.
Fermentation in yeasts is used in brewing and baking industries. Similarly, the soy sauce is
made through the fermentation by a fungus Aspergillus.
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The process of respiration involves complex series of reactions. For the study of all the reactions
of glucose oxidation, we will go into the mechanism of aerobic respiration. Aerobic respiration is
a continuous process, but for convenience we can divide it into three main stages; 1- glycolysis, 2-
Krebs cycle and 3- electron transport chain.
Glycolysis occurs in cytoplasm and oxygen is not involved in this stage. That is why, it occurs in
both types of respiration i.e. aerobic and anaerobic. In glycolysis, glucose (6C) molecule is broken
into two molecules of pyruvic acid (3C).
In Krebs cycle, the pyruvic acid molecules are completely oxidized, along with the formation of
ATP, NADH and FADH2 . Before entering in Krebs cycle, pyruvic acid is changed into a 2-carbon
compound called acetyl-CoA.
Electron transport chain is the final step of cellular respiration. It is the transfer of electron on an
electron transport chain. In this step, NADH and FADH2 release electrons and hydrogen ions. These
electrons are taken up by a series of electron carriers. When electrons move through the series of
electron carriers they lose energy, which is used to synthesize ATP. At the end of chain, electrons
and hydrogen ions combine with molecular oxygen and form water.
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Practical Work:
Investigation to find out that carbon dioxide is released during aerobic respiration
In aerobic respiration, the C-H bonds of glucose are broken. The hydrogen released in this breakage
is taken by oxygen to produce water and CO2 is left behind.
Problem:
Does the process of respiration produce CO2 ?
Hypothesis:
CO2 is produced as one of the end products of aerobic respiration.
Deduction:
An organism carrying out aerobic respiration will release CO2
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Apparatus required:
Flasks, potassium hydroxide, lime water, an animal.
Background information:
• Lime water readily absorbs CO2 .
Procedure:
Set the apparatus as Figure 7.14 and observe the changes in lime water.
Observation:
Color changes would be observed in lime water.
Results:
CO2 is produced during respiration.
Evaluation:
i. What color changes occurred in lime water?
ii. Why did we use potassium hydroxide and
lime water?
Practical Work:
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Background information:
• Seeds contain embryos of plants which consist of many cells.
• Boiling of seeds kills their cells.
• High temperature causes decay of dead cells.
Procedure:
1. Take pea seeds and keep them in water for 24 hours.
2. Wash the seeds with some germicide (e.g. 01% chlorine or sodium hypochlorite solution)to kill
the bacteria present on their surface.
3. Boil some seeds for ten minutes so that their cells die. Cool these seeds so that these should
not decay.
4. Put both sets of seeds (alive and dead) in separate flasks and label them as ‘a and
‘b’respectively. (Do not fill the flask up to their mouths.)
5. Insert a thermometer in the mouth of each flask and seal the mouth with cotton as in Figure
7.15.
6. Invert the flasks and fix them with stands
and note the temperatures on both
thermometers.
7. Keep the apparatus for about 4 hours.
Observation:
The temperature reading in the
thermometer put in flask ‘a’ rises but there
is no rise in the temperature reading in the
second thermometer.
Results:
Respiration in the live cells of seeds in flask
‘a’ results in the release of heat.
Error analysis:
If there is rise in temperature in the
apparatus flask ‘b”, it may be due to
Figure 7.15: Experiment set up to investigate the release of heat during
some rise in room temperature. In such respiration
conditions, the temperature in flasks ‘a’ will
raise more than the temperature in flask ‘b’.
Evaluation:
i. Why were the flasks not filled up to their mouths?
ii. Why did the temperature in flask ‘a’ rise and why did not in flask ‘b’?
iii. Is there any heat released during respiration in our bodies?
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SHORT QUESTIONS
1. Why is it said that all life forms are dependent on photosynthesis?
2. What structures and phenomena are involved in the intake of carbon dioxide and water by
plants?
3. In what ways the respiratory energy is used in the body of organisms?
4. What is the importance of anaerobic respiration?
TERMS TO KNOW
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Activities
1. Demonstrate the process of photosynthesis using an aquatic plant, like Hydrilla.
2. Identify and label the cellular and tissue structures in the CS of a leaf through observation under
the microscope.
3. Investigate the necessity of chlorophyll, light, carbon dioxide, using appropriate controls.
4. Demonstrate the process of respiration in germinating seeds by using limewater.
5. Investigate the release of carbon dioxide and heat during aerobic respiration in germinating
seeds.
ON-LINE LEARNING
1. [Link]/wiki/Bioenergetics
2. [Link]/
3. [Link]/[Link]
4. [Link]/learn/heart/systems/[Link]
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