Chapter 1 Introduction
Chapter 1 Introduction
CHAPTER1 ___
1 INTRODUCTION
Pesticides are chemical compounds that are used to kill pests, including insects, rodents,
fungi and unwanted plants. While the term pesticides is now somewhat considered as
synthetic chemical compounds. But some naturally occurring compounds or natural extracts
have been used as pesticides since ancient times Pesticides play a vital role in modern
agriculture by increasing food production, preventing crop loss, and enhancing the quality of
crops. In the face of challenges like pest resistance, climate change, and increasing global
populations, pesticides are an essential tool for farmers. They help ensure that crops grow in
healthy, pest-free environments, which leads to greater yields and fewer crop failures.
The use of pesticides also supports the economy by reducing the damage caused by pests,
increasing food availability, and allowing for the cultivation of diverse crops. Without
effective pesticide management, pest outbreaks could lead to a significant reduction in crop
production, which could, in turn, result in food shortages and economic loss.
Pesticides play a vital role in modern agriculture by increasing food production, preventing
crop loss, and enhancing the quality of crops. In the face of challenges like pest resistance,
climate change, and increasing global populations, pesticides are an essential tool for
farmers. They help ensure that crops grow in healthy, pest-free environments, which leads to
greater yields and fewer crop failures.
The use of pesticides also supports the economy by reducing the damage caused by pests,
increasing food availability, and allowing for the cultivation of diverse crops. Without
effective pesticide management, pest outbreaks could lead to a significant reduction in crop
production, which could, in turn, result in food shortages and economic loss.
Public
CHAPTER1 ___
Public
CHAPTER1 ___
A) Insecticides
1 Organo halogen 5 Neonicotinoids 9 Pyrroles
Organophosphorus
2 6 Spinosyns 10 Benzoylureas
3 Carbamates 7 Neriestoxin 11 Quinazolines
Fiproles/
4 Pyrethroids 8 12 Antibiotics
Phenylpyrazoles
B) Fungicides
1 Aliphatic nitrogen 7 Morpholine 13 Sulphur compounds
2 Amide 8 Aromatic 14 Dicarboximide
Conazole/
3 Acylamino acid 9 15 Dithiolane
Triazoles
4 Anilide 10 Copper 16 Dinitrophenol
Carbamate / Methoxyacrylat Dichlorophenyldicarboxi
5 11 17
benzimidazole e strobilurin mide
6 Antibiotic 12 Dithiocarbamate
C) Herbicides
Public
CHAPTER1 ___
Public
CHAPTER1 ___
Chemical Class Mode of Action Examples Comments
Inhibit plant enzyme Clodinafop Targeted at plants, with
processes, especially propargyl ,Glyphos varying toxicity levels
Herbicides
involved in amino acid ate, Atrazine, depending on the
synthesis Dicamba compound
Target fungi that cause
Mancozeb,
Inhibit fungal cell growth plant diseases, varying
Fungicides Chlorothalonil,
or reproduction toxicity to humans and
Tebuconazole
animals
Often target coagulation Warfarin, Used for controlling
Rodenticides or inhibit metabolic Bromadiolone, rodents, usually toxic and
processes Zinc phosphide require careful application
Target bacterial
pathogens in plants and
Inhibit bacterial cell Copper sulfate,
Bactericides animals, some are used as
function or growth Streptomycin
medicinal treatments for
animals
[Link] Classification bassed on Environmental Persistence
Category Chemical Composition Examples Characteristics
Remain in the Can accumulate in the food
Persistent DDT, Aldrin,
environment for chain and cause long-term
Pesticides Chlordane
extended periods environmental damage
Malathion, Break down within a few days
Non-Persistent Break down quickly in
Pyrethroids, to weeks, considered more
Pesticides the environment
Chlorpyrifos eco-friendly
Degrade naturally in the Bacillus Environmentally friendly,
Biodegradable
environment through thuringiensis (Bt), break down into non-toxic
Pesticides
microbial activity Spinosad components
Chemical
Type of Pesticide Examples Mode of Action
Structure
Effective against a wide
Aromatic Organic chemicals with an
DDT, Lindane range of pests, persistent
Pesticides aromatic ring structure
in the environment
Organic chemicals without Used primarily for insect
Aliphatic Malathion,
an aromatic ring (alkanes, control, decompose more
Pesticides Pyrethroids
alkenes) easily than aromatic types
Organic chemicals with a Target specific pests by
Imidacloprid
Heterocyclic ring structure containing interfering with their
(neonicotinoid),
Pesticides atoms other than carbon nervous system or
Fipronil
(nitrogen, oxygen) metabolism
Public
CHAPTER1 ___
Chemical
Toxicity Level Examples Characteristics
Composition
Made with chemicals Can cause severe damage or
Highly Toxic Cyanide, Methyl
that have a high degree death to humans, animals, and
Pesticides bromide, Aldrin
of toxicity the environment
Malathion, Toxic to pests but less so to
Moderately Chemicals with
Chlorpyrifos, humans and animals with
Toxic Pesticides moderate toxicity
Diazinon proper handling
Chemicals with low Neem oil, Generally safer for humans
Low Toxicity
toxicity to humans and Diatomaceous earth, and animals, and can be used
Pesticides
animals Insecticidal soap in organic farming
WHO recommended classification of pesticides on basis of hazard/Toxicity?
Table 1.3: Classification of pesticides according to toxicity, (expressed as LD50)
Public
CHAPTER1 ___
The two stereoisomers are refered to as (+) and (-) or dextro and levo isomers respectively
based on their direction of optical rotation under certin defined conditions. Chiral molecules
can rotate the plane of polarized light, a phenomenon known as optical activity. The direction
and magnitude of this rotation depend on the specific enantiomer. One enantiomer may rotate
light in a clockwise direction (dextrorotatory), while the other rotates light counterclockwise
(levorotatory).The actual configuration in space at the steregenic (chiral) center is designated
as R or S. The R means Rectus in Latin (means right) and S means Sinister in Latin (means
Left). Molecules that rotate the plane polarised light to right is said as R isomer. Molecule
that rotate the plane polarised light to left is said as S isomer.
Chirality plays an essential role in the design and function of agrochemicals, which include
pesticides, herbicides, fungicides, and other chemicals used in agriculture. In agrochemicals,
chirality can significantly influence the effectiveness, toxicity, and environmental impact of a
compound. A molecule is chiral if it has a non-superimposable mirror image, which can lead
to the existence of two distinct enantiomers (R and S isomers), each with potentially different
properties.
Many agrochemicals are chiral, meaning they contain one or more chiral centers. The
specific configuration (R or S) of these chiral centers can influence how the molecule
interacts with biological targets such as enzymes, receptors, and other molecules in plants,
pests, or microbes.
Selectivity and Efficiency: One enantiomer of a chiral agrochemical may be more effective
in controlling a pest or plant disease than the other. In some cases, one enantiomer may even
be inactive, while the other is highly active. This means that understanding and controlling
chirality in agrochemical molecules can improve the selectivity and efficiency of these
chemicals, reducing the amount needed for effective action.
Public
CHAPTER1 ___
Reduced Environmental Impact: By using the most effective enantiomer, farmers can
minimize the overall use of chemicals in agriculture, which reduces the environmental
impact. The less-active enantiomer might not only be ineffective but could also be more toxic
to non-target organisms. Therefore, using a chiral agrochemical in its optimal form can
decrease the environmental footprint.
Increased Potency: Using a single, active enantiomer can make a pesticide or herbicide
more effective at lower doses, which can help reduce the overall chemical load on the
environment.
Better Environmental Persistence: One enantiomer may degrade more rapidly in the
environment than the other, so the proper use of the correct enantiomer can help ensure that
chemicals break down quickly and safely, reducing long-term environmental impact.
Public
CHAPTER1 ___
Insecticides: Pyrethroids (like permethrin) and fipronil are chiral insecticides, with
enantiomers affecting their insecticidal potency) and fipronil are chiral insecticides,
with enantiomers affecting their insecticidal potency.
Pyrethroids: Pyrethroids are a class of synthetic insecticides that are structurally related to
pyrethrins, natural insecticides derived from chrysanthemums. Many pyrethroids are chiral,
and their insecticidal activity is highly dependent on the specific enantiomer used. For
instance, some enantiomers may be more toxic to insects but less harmful to mammals,
which makes the selective use of one enantiomer advantageous.
Glyphosate: Glyphosate, one of the most widely used herbicides, is an example of a chiral
molecule. It is a racemic mixture, containing equal parts of both enantiomers. The active
ingredient in glyphosate (the enantiomer that interacts with the target enzyme in plants) is
only one of the two enantiomers, while the other may have lesser or no herbicidal activity.
fungal diseases. It contains chiral centers in its structure, resulting in the potential for
different enantiomers to have varying levels of biological activity. The fungicide works by
inhibiting ergosterol biosynthesis in fungi, disrupting their cell membranes. The specific
enantiomeric composition of prothioconazole in formulations can influence its effectiveness
Public
CHAPTER1 ___
and environmental impact, making the study of chirality important in its development and
use.
Fungicides like tebuconazole and fluconazole are often chiral compounds. The different
enantiomers can have varying levels of activity against fungal species, and, as with other
agrochemicals, selecting the correct enantiomer for the intended target organism can improve
effectiveness.
Pesticide formulations refer to the physical form in which a pesticide is prepared and
presented for use. The formulation determines how the pesticide is applied, how it
behaves during application, and its effectiveness. There are various types of pesticide
formulations, each designed to optimize performance, ease of use, safety, and
environmental impact.
Public
CHAPTER1 ___
Here’s a breakdown of the main types of other ingredients found in pesticide
formulations:
1. Solvents
Purpose: Solvents are used to dissolve or disperse the active ingredient in the
pesticide formulation, making it easier to apply. They help to ensure that the pesticide
can be evenly distributed during spraying or other application methods.
Common Types:
o Water (for aqueous formulations like emulsifiable concentrates).
o Organic solvents such as acetone, methanol, xylene, or toluene.
Example: In an emulsifiable concentrate (EC), the solvent helps to dissolve the active
ingredient and enables it to mix with water during application.
Purpose: Surfactants help to improve the spreading, wetting, and adhesion of the
pesticide on the target surface (e.g., plant leaves or soil). They also enable the active
ingredient to mix properly with water in formulations like emulsions and suspensions.
Types:
o Non-ionic surfactants (e.g., alkylpolyglycosides).
o Anionic surfactants (e.g., sodium lauryl sulfate).
o Cationic surfactants (e.g., cetyltrimethylammonium bromide).
Example: Surfactants in herbicide formulations help the chemical stick to plant
leaves and improve the herbicide's penetration.
3. Stabilizers
11
Public
CHAPTER1 ___
o UV stabilizers: Protect the active ingredient from breaking down when
exposed to sunlight.
o pH stabilizers: Maintain an appropriate pH for the formulation.
Example: UV stabilizers in pesticide sprays help protect the active ingredient from
light-induced degradation, ensuring it remains effective.
Purpose: Fillers and bulking agents are used to increase the volume of the
formulation, making it easier to handle, apply, and store. These ingredients may also
help to dilute highly concentrated pesticides to ensure safe application.
Types:
Clay: Used in formulations like dusts or granules for bulkiness and ease of
application.
Example: Talc or kaolin clay can be used in fungicide wettable powder formulations.
5. Dispersing Agents
Purpose: Dispersing agents help the active ingredient to evenly disperse in liquids,
preventing the pesticide from settling or clumping together. These are particularly
important in suspension concentrates (SC) and emulsifiable concentrates (EC).
Example: Polyvinyl alcohol (PVA) is commonly used in suspension concentrates to
ensure even dispersion of solid particles.
6. Preservatives
Purpose: Preservatives are added to prevent microbial growth (fungi, bacteria, etc.)
in liquid formulations. They help to extend the product's shelf life, especially for
water-based formulations.
12
Public
CHAPTER1 ___
Example: Methylparaben and propylparaben are common preservatives used to
prevent bacterial or fungal contamination in aqueous pesticide formulations.
7. Thickeners
Purpose: Thickeners or gelling agents are used to increase the viscosity of liquid
formulations, making them easier to apply and less likely to drip. They can also
improve the stability of emulsions and suspensions.
Types:
o Xanthan gum: A natural polysaccharide that thickens liquid formulations.
o Cellulose derivatives: Used to modify the viscosity of liquid formulations.
Example: Thickeners in gel formulations (like for termite control or spot treatment)
help the product stay in place on vertical surfaces.
8. Antifoaming Agents
Purpose: Antifoaming agents are added to prevent excessive foam formation during
the mixing and application of pesticide formulations. Foam can interfere with the
proper application of the pesticide and reduce its effectiveness.
Types:
o Silicone-based antifoams: Very effective at controlling foam.
o Organic oils: Also used to reduce foam in pesticide formulations.
Example: Silicone-based antifoams in pesticide sprayers ensure smooth,
uninterrupted application.
Purpose: Colorants are often added to make the pesticide visually distinctive,
allowing users to see where the pesticide has been applied and ensuring proper
coverage. They also help with product identification and regulatory compliance.
Example: Fluorescent dyes or food-grade colorants like brilliant blue or green
dyes used in pesticide formulations for easier identification.
13
Public
CHAPTER1 ___
Purpose: Some formulations include aromatic compounds to mask the strong or
unpleasant odors of the active ingredients, making the pesticide easier and more
pleasant to use.
Example: Lemon or pine scents added to insecticides to improve user experience,
especially in household pest control products.
Purpose: Buffering agents are added to adjust and maintain the pH of the pesticide
formulation to optimize the stability of the active ingredient and enhance its
performance.
Example: Citric acid or sodium carbonate to maintain the pH for certain
pesticide formulations.
Emulsion: When one liquid is dispersed (as droplets) in another liquid is known
as Emulsion. Each liquid retains its own identity. To keep emulsion from
14
Public
CHAPTER1 ___
separating agitation is required to some extent. Usually Emulsions have milky
appearance. When product is mixed with water, an emulsion (oil in water) is
formed. An emulsifying agent (emulsifier) formulated into the product which
helps to prevent the emulsion fromseparating.
A) LIQUIDFORMULATIONS
These are generally mixed with water, but in some times crop oil, diesel,
kerosene or some other light oil used as carrier.
a) Emulsifiable Concentrates (EC orE):
These formulations usually contain a liquid active ingredient, one or more
petroleum-based solvents which give EC formulation their strong odour, and an
emulsifying agent that allows formulation to be mixed with water to form emulsion.
b) Solutions(S):
Some pesticide active ingredients dissolve readily in a liquid carrier such as
water or petroleum-based solvent and they form a solution which does not settle out
or separate into layers.
c) InvertEmulsions:
It contains a water-soluble pesticide dispersed in oil as carrier. Invert
emulsion require a special kind of emulsifier that allows the pesticide to mix with a
large volume of petroleum-based carrier as fuel oil.
d) Flowables (F)/ Liquids(L):
These formulations combine many of the emulsifiable concentrates and
wettable powders. When the A.I. is a solid powder and that does not dissolve in
either of water or oil, then the A.I. is impregnated on a substance such as clay, is
ground to a very fine powder. This powder is then suspended in a small amount of
liquid carrier.
e) Aerosols(A):
These formulations contain one or more A.I. and a solvent. Most aerosols
contain a low percentage of A.I.
f) LiquidBaits:
15
Public
CHAPTER1 ___
Liquid baits consist of insecticides and rodenticides which are being
formulated as baits.
B) DRY OR SOLIDFORMULATIONS
These formulations can be divided into two types: ready-to-use and concentrates
that must be mixed with water to be applied as spray.
a) Dusts(D):
These formulation are ready to use and contain a low percentage of A.I.
(10% or less by weight), and a very fine, dry inert carrier usually talc, chalk, clay,
nut bulls or sometimes volcanic ash. A few dust formulations contain a high
percentage of active ingredients which are used in seedtreatments.
b) Tracking powder:
Tracking powders are special dust used for control and monitoring rodent
and insect.
c) Baits (B):
When an A.I. is mixed with food or another attractive substance is known as
baits. They either attract the pest or placed where the pest will find it. These baits
when eaten by pests they got killed as it contains pesticides.
16
Public
CHAPTER1 ___
g) Wettable Powders (WP orW):
WP is dry, finely ground formulations that look like as dusts formulations.
Usually they are mix with water for application as a spray. WP contains about 5 to
95 % A.I. by weight: usually 50% or more.
h) Soluble Powders (SP orWSP):
SP formulation looks like WP. However, when mixed with water, SP
dissolve readily and form a true solution. Usually 15 to 95 % by weight A.I. is
present.
i) Water-dispersible Granules (WDG) or Dry Flowables(DF):
WDG also known as DF, are like WP, except instead of being dust like, they
are formulated as small, easily measured granules. WDG must be mixed with water
to be applied. Once in the water, the granules break apart into fine particles similar
to WP. Constant agitation is required to keep suspended in water. High percentage
of A.I. often as much as 90% by weight ispresent.
C) OTHERFORMULATIONS
They include chemicals that cannot be clearly classified either as liquid or as
dry/solid pesticide formulations.
a) Microencapsulatedmaterials:
Liquid or dry pesticide particles covered in a polymer coating to produce
microencapsulated formulations.
b) Water solublepackets:
They reduce the mixing and handling hazards of highly toxic pesticides.
These bags when drop into a filled spray tank, they readily dissolve and release their
contents to mix with the water.
c) Attractants:
Attractants includes pheromones, a chemical which is secreted by an
animal, especially an insect, which influence the behaviour or developments of
others of the same species. Attractants were used in sticky traps and capturebags.
d) Repellents:
Various types of insect repellents are available market in the form of
aerosols and lotion formulations. These can apply on skin or clothing or to plant
foliage to repelinsects.
17
Public
CHAPTER1 ___
e) Fumigant:
Fumigant forms a gas when applied. Some liquid A.I. is packed under high
pressure and changes to gases when they are released. Used for structural pest
control, in food facilities, in soil, greenhouse.
18
Public
CHAPTER1 ___
1.2. CHROMATOGRAPHY
In chemical analysis some methods are truly specific to a particular analyte only. The
analyte of interest must be separated from the sample matrix into individual
components that may be present in sample. Chromatographic technique is single step
processes which simultaneously separates a mixture into its individual components
and provide a quantitative amount of each constituent. Samples may be in gaseous,
liquid or solid nature and can be in a simple mixture to a multi component mixture of
differing [Link] allows for high-resolution separation of complex
[Link]’s versatile and can be used with many types of samples, from liquids and
gases to solids.
Mikhail Tsvet1903 Russian botanist. He developed the first chromatography
method to separate plant pigments (like chlorophyll) in a column of calcium
carbonate. He referred to this technique as "chromatography," from the Greek words
"chroma" (color) and "grapho" (to write), as the pigments would form distinct color
bands as they traveled through the column. This was the first demonstration of the
principle of separating substances based on their physical or chemical
[Link] colour has little to do with modern chromatography, the name
has persisted and is still used for all separation techniques, which consist of a mobile
phase and a stationaryphase.
19
Public
CHAPTER1 ___
Public
CHAPTER1 ___
Those components held preferentially in the stationary phase are retained longer in
the system than those that are distributed selectively in the mobile phase. As a
consequence, solutes are eluted from the system as local concentrations in the
mobile phase in the order of their increasing distribution coefficients with respect to
the stationary phase; ipso facto a separation is achieved
Chromatography can be classified in many ways based on the mobile phase (liquid,
gas, or supercritical fluid), the stationary phase (solid, liquid, or gel), the mechanism of
separation (adsorption, partition, ion-exchange, etc.), and the detection method. The
method chosen depends on the sample's properties and the specific separation
[Link] can be classified in several ways based on the nature of
the stationary phase, the mobile phase, and the mechanism of separation
21
Public
CHAPTER1 ___
Type of Stationary Mobile
Principle Examples/Applications
Chromatography Phase Phase
Solid or
Gas Separation Volatile compounds,
liquid phase Inert gas
Chromatography based on essential oils, food, and
(e.g., silica (e.g., helium)
(GC) volatility environmental analysis
gel)
Supercritical Solid or Separation of lipids,
Separation with Supercritical
Fluid liquid phase pharmaceuticals, and
supercritical CO₂ +
Chromatography (e.g., silica high-molecular
fluids modifiers
(SFC) gel) compounds
Capillary
Capillary Separation by Protein, peptide, DNA
column Electrolyte
Electrophoresis size-to-charge analysis, small-scale
(uncoated or solution
(CE) ratio separation
coated)
Separation
Thin Layer Thin layer Solvent or Qualitative analysis of
based on
Chromatography of silica gel solvent organic compounds,
differential
(TLC) or alumina mixture monitoring reactions
affinity
1) AdsorptionChromatography
22
Public
CHAPTER1 ___
2) PartitionChromatography
23
Public
CHAPTER1 ___
3) Ion ExchangeChromatography
This method relies on the ionic interactions between the charged stationary phase and
the ions in the sample [Link] exchange chromatography is similar to partition
chromatography which has coated solid as stationary phase. A resin which acts as the
stationary solid phase is used to covalently attach anions or cations onto it. The
opposite charge solute ions in the mobile liquid phase are attracted to the resin by
electrostatic forces.
24
Public
CHAPTER1 ___
4)Molecular ExclusionChromatography
Separation is based on the molecular size and the exclusion of larger molecules from the
pores of the stationary phase. Size-exclusion chromatography, also known as molecular sieve
chromatography. Also known as gel permeation or gel filtration chromatography, this type of
chromatography no equilibrium state is established between the stationary phase and solute.
A porous gel separates the molecules according to its size when the liquid or gaseous phase
passes through it. The pores of gel are normally small size and exclude the larger size solute
molecules, but allow smaller size molecules to enter the gel, causing them to flow through a
larger volume. This causes the larger size molecules to pass through the column at a faster
rate than the smaller ones. Thus, separation occurs according to particle size ofmolecules.
Size exclusion chromatography (SEC) separates molecules based on their size by filtration
through a gel. The gel consists of spherical beads containing pores of a specific size
distribution. Separation occurs when molecules of different sizes are included or excluded
from the pores within the matrix. Small molecules diffuse into the pores and their flow through the
column is retarded according to their size, while large molecules do not enter the pores and are
eluted in the column's void volume. Consequently, molecules separate based on their size as they
pass through the column and are eluted in order of decreasing molecular weight.
25
Public
CHAPTER1 ___
5) Affinity Chromatography
In affinity chromatography, the stationary phase contains a ligand that specifically binds
to a target molecule (such as an antibody, enzyme, or protein). This allows for highly
specific separations, often used for purifying proteins and [Link] stationary
phase consists of a support medium, on which the substrate (ligand) is bound covalently,
in such a way that the reactive groups that are essential for binding of the target molecule
are [Link] the crude mixture of the substances is passed through the chromatography
column, substances with binding site for the immobilized substrate bind to the stationary
phase, while all other substances is eluted in the void volume of the [Link] the
other substances are eluted, the bound target molecules can be eluted by methods such as
including a competing ligand in the mobile phase.
26
Public
CHAPTER1 ___
1) ColumnChromatography
The sample mixture is set on the top of the column and is made to absorb on the top of the
stationary phase. Eventually, the mobile phase which is applied to the column is used to
remove the mixture via the stationary phase. Separation of compounds in column
chromatography by utilizing the molecule’s polarity. The rate at which molecules move in
the column during the separation process depends on their polarity. As the mobile phase
comes out of the column it is collected in small fractions in the test tube. Then it is allowed to
isolate and purify. Later, the removal of salt is done by a rotary evaporator to obtain the
separated compound. Column chromatography is the most widely used technique for the
purification of compounds due to its versatility. Also, it is a very convenient process.
27
Public
CHAPTER1 ___
2) PaperChromatography
28
Public
CHAPTER1 ___
Paper chromatography remains a valuable, simple, and low-cost technique for
separating and analyzing mixtures, especially when high resolution or large
quantities are not required. It is particularly useful in educational settings,
preliminary analysis, and qualitative assessments of various substances. Despite its
limitations in terms of resolution and capacity, its simplicity makes it an accessible
tool for many different applications in chemistry, biology, and environmental
sciences.
29
Public
CHAPTER1 ___
in various fields of research and industry. Its simplicity, speed, and effectiveness for
qualitative analysis make it an essential tool in organic chemistry, biochemistry,
pharmaceuticals, and environmental science.
F
igure 1.8: Separation phenomenon in Thin Layer Chromatography
1) Gas Chromatography(GC)
The stationary phase is adhered to the inside of a glass tube having very small
diameter known as capillary column or a solid matrix inside a larger metal tube
known as packed column. The stationary phase is a liquid(such as silicone oil,
polyethyleneglycol, or other organic liquids) coated on the surface of a solid support
(like silica geloralumina). The column is typically a capillary column made of a thin,
30
Public
CHAPTER1 ___
flexible material, often stainless steel or glass. The column can be packed with
stationary phase or be capillary (thin tubes coated with stationary phase). Capillary
columns generally offer better separation efficiency.
2) Liquid Chromatography(LC)
Public
CHAPTER1 ___
analyzing complex mixtures in many industries and research fields. Whether used in
Agrochemical pharmaceutical analysis, environmental monitoring, or chemical
synthesis, LC allows for high precision, excellent resolution, and the capability to
analyze a broad range of substances. Techniques like HPLC, with its speed and
sensitivity, have revolutionized analytical chemistry and continue to be integral to
modern scientific and industrial practices.
A supercritical fluid occurs when a substance is heated above its critical temperature
and pressurized beyond its critical pressure. At this point, the substance exhibits
properties of both gases and liquids, making it an ideal solvent for many separation
processes. Common supercritical fluids used in SFC include carbon dioxide
(CO₂), nitrous oxide (N₂O), andethanol.
Public
CHAPTER1 ___
their electrophoretic mobility with the use of an applied voltage. The electrophoretic
mobility is dependent upon the charge of the molecule, the viscosity, and the atom's
radius. The rate at which the particle moves is directly proportional to the applied
electric field--the greater the field strength, the faster the mobility. Neutral species
are not affected, only ions move with the electric field. If two ions are the same size,
the one with greater charge will move the fastest. For ions of the same charge, the
smaller particle has less friction and overall faster migration rate. Capillary
electrophoresis is used most predominately because it gives faster results and
provides high resolution separation. It is a useful technique because there is a large
range of detection methods available.
1) ChiralChromatography
Public
CHAPTER1 ___
giving differing affinities between the analytes. In both normal and reversed phase
chromatography columns with chiral stationary phase are commerciallyavailable.
2) Pyrolysis GasChromatography
Pyrolysis Gas Chromatography (Py-GC) is a specialized analytical technique
that combines pyrolysis (thermal decomposition) with gas chromatography (GC) for
the analysis of complex materials. This technique is particularly useful for studying
substances that are difficult to analyze directly, such as polymers, plastics, and
complex natural materials.
Pyrolysis refers to the process of heating a sample to a high temperature (typically
400°C to 1000°C) in the absence of oxygen. This causes the sample to decompose into
smaller volatile fragments, typically in the form of gases, which can then be
[Link] pyrolysis process breaks down large, complex molecules like polymers,
rubber, oils, and fossil fuels into smaller, more volatile compounds that are easier to
analyze using GC.
34
Public
CHAPTER1 ___
(6) FlashChromatography
(7) CapillaryChromatography.
(8) Capillary Electrophoresis (CE)
(9) Supercritical Fluid Chromatograph
(10)Preparative High-Performance Liquid Chromatography ([Link])
1.3. INTRODUCTION TO HIGH PERFORMANCE LIQUID
CHROMATOGRAPHY (HPLC)
1.3.1. PRINCIPLE
HPLC is recognized for its precision, speed, and efficiency in separating complex
mixtures and is an essential tool in various industries, including Agrochemical,
pharmaceuticals, environmental testing, food and beverage analysis, and forensic
science clinical and medical laboratories ,cosmetic industry
Public
CHAPTER1 ___
phases, one of which does not move i.e. stationary phase and the other that moving
mobile phase’. When mobile phase is liquid, this technique is known as ‘liquid
chromatography’. Principle of separation is based on the differences in the
distribution of species between two immiscible phases, in which the mobile phase is
a liquid which passes through a stationary phase packed in a column. It is mainly
based on mechanisms of adsorption, mass distribution, ion exchange, size exclusion
or stereo-chemicalinteraction.
Earlier liquid chromatography is carried out in long glass columns with wide
diameter. Nowadays with the help of latest technology, the particle diameters were
reduced as small as to below 10 μm (generally 3-5 µm) and replacement of glass
columns to steel ones which can sustain high pressure. The performance is improved
by applying high flow rate to mobile phase by using high pressure pumps. Due to
this development, mostly called as ‘high-performance liquid chromatography’ or
‘high-pressure liquid chromatography’(HPLC).It is employed to separate, identify,
and quantify the components of a mixture in liquid form. HPLC is an advanced
version of traditional liquid chromatography (LC), offering higher resolution and
speed in separation due to the use of high pressure to push the mobile phase through
the column.
1.3.2. HPLCINSTRUMENTATION
36
Public
CHAPTER1 ___
HPLC instrument generally constitute of solvent reserviour autosampler,
pumps, and a detector. The autosampler injects specific volume of sample mixture
into the mobile phase stream which carries it into the column. The pumps deliver the
desired flow (isocratic or gradient) of the mobile phase through the column. The
detector generates a signal proportional to the amount of sample component
emerging from the column, The heart of the system is the column where separation
occurs. The information that can be obtained using HPLC includes identification,
quantification, and resolution of a compound.A digital microprocessor
(Communication Bus Module) and user software (LC Solution) control the HPLC
instrument and provide data analysis.
Due to automatic instrumentation and calculation which is carried out by
integrator itself in modern HPLC that offers saving of manual labour. All the
operations are carried out by a computer, which provides long periods of unattended
operation. All these advantages make HPLC more efficient over the all
chromatographic techniques in terms of separation, speed, sensitivity, easy sample
recovery, automation, integration, handling and maintenance. The wide applicability
of HPLC makes it as a most important separation tool in the field of analysis.
37
Public
CHAPTER1 ___
modern HPLC instrument, degasser with vacuum pump and pre-column facility is
available.
Public
CHAPTER1 ___
programmed to control to change desired sample volume range from 0.1µ to 100µl,
the number of injections i.e. replication, the interval between injections and rinse
cycles.
(c) Columns
HPLC columns are mostly made up of smooth bore polished stainless steel, are
between 50 and 300 mm long, and have an internal diameter of between 2 and 5 mm.
They are commonly filled with a stationary phase with a particle size of 3–10 µm.
Columns with internal diameters of less than 2 mm are often referred to as microbore
columns. Ideally, the temperature of the mobile phase and the column should be kept
constant during an analysis. Considered the “heart of the chromatograph” the column’s
stationary phase separates the sample components of interest using various physical
and chemical parameters
39
Public
CHAPTER1 ___
Stationary
BondedPhase Characteristics Applications
Phase
- Reverse phase chromatography
Slica- - C18
- Non-polar (most common for general separations
based (Octadecylsilane)
of organic compounds).
40
Public
CHAPTER1 ___
the [Link] is a chromatographic technique used to separate charged particles
(ions) based on their charge properties. It utilizes a stationary phase (usually a
charged resin or material) to attract and bind ions in a sample, allowing for their
separation as they are displaced by other ions in the mobile phase.
In ion-exchange chromatography, the stationary phases are usually synthetic
organic resins; cation-exchange resins contains negatively charged active sites which
separates positively charged substances, while anion-exchange resins have positively
charged active sites which separates compounds with negatively charged groups.
Water-soluble ionic or ionisable compounds are attracted to the resins. The
chromatographic separation occurs on differences in affinity of [Link]
exchange chromatography is a versatile and powerful tool, particularly valuable in
the separation of ions, proteins, and nucleic acids.
Size Exclusion Chromatography (SEC), also known asGel Filtration
Chromatography (GFC), is a chromatographic technique used to separate molecules
based on their size (or molecular weight). It is a non-interactive separation method,
meaning that the separation process relies on the physical size of the molecules
rather than on their chemical properties. This makes SEC particularly useful for
purifying proteins, polymers, and other [Link] size-exclusion
chromatographic columns are packed with a porous stationary phase gel. Smaller
size molecules enter the pores and are increasingly retained as molecular size
decreases, i.e. large molecules elutes faster than small [Link] Filtration
Chromatography Which uses hydrophilic packing to separate polar species and uses
mostly aqueous mobile phases. This technique is mostly used to identify the
molecular weights of large-sized proteins & bio-molecules. Gel Permeation
Chromatography: Which uses hydrophobic packing to separate non-polar species
and uses non-polar organic solvents. This technique is used to identify the molecular
weights of polymers
For chiral chromatography, special chemically modified polar stationary
phases, e.g. cellulose or amylose derivatives, proteins or peptides, cyclo-dextrin etc.,
use for the separation of enantiomers are used.
Table 1.6: Commonly used chiral column Stationary phases
Public
CHAPTER1 ___
Chiral Stationary Phase Type of Mechanism of
Common Applications
(CSP) Chirality Separation
helical structure, Pesticides molecule
Derivatives
hydrogen pharmaceutical
(polysaccharide-based) (Amylose or
bonding, steric compounds, amino acids,
Cellulose)
interactions peptides
Chiral Separation of chiral
Polysaccharide
recognition Pesticides molecule
Chiracel® (polysaccharide- Derivatives
through helical pharmaceutical
based) (Amylose or
structure, van compounds, amino acids,
Cellulose)
der Waals forces peptides
Steric
interactions,
Separation of chiral
Chiralcel® Polysaccharide hydrogen
pharmaceuticals,
(polysaccharide-based) Derivatives bonding, and
steroids, amino acids
hydrophobic
interactions
Formation of
inclusion Separations of small
Cyclodextrin
complexes, chiral molecules like
Cyclodextrin-based CSPs Derivatives (e.g.,
differential sugars, drugs, and
β-CD, γ-CD)
binding of organic compounds
enantiomers
Interaction
Separation of chiral
through
Amylose- acids, amines, alcohols,
Chiralpak® AD hydrogen
Derived CSP and biologically active
bonding and
compounds
steric hindrance
Steric and
Separation of drugs,
Cellulose- hydrogen
Chiralpak® AS amino acids, and organic
Derived CSP bonding
molecules
interactions
Used in complex organic
Pirkle-type Interaction via
molecule separations,
Lux® (Pirkle-Type CSP) (Chiral Selective chiral ligand
such as pesticides and
Ligands) interactions
natural products
Molecular
Protein and peptide
BSA (Bovine Serum Protein-Based recognition and
separations,
Albumin) CSP binding of
biomolecular studies
enantiomers
Formation of
Separation of drugs,
Chiral-Dex® (cyclodextrin- Cyclodextrin inclusion
environmental pollutants,
based) Derivatives complexes for
and food additives
chiral separation
Crown Ether-based CSPs Crown Ether Coordination Separation of metal
Ligands with metal ions complexes, ions, and
or other chiral ligands
components,
differential
42
Public
CHAPTER1 ___
Chiral Stationary Phase Type of
Mechanism of
Common Applications
(CSP) Chirality
Separation
interactions
Interaction via Separation of
Polysaccharide hydrogen pharmaceutical
Cellulose Tris(3,5-
with a chiral bonding, steric compounds, amino acids,
dimethylphenylcarbamate)
ligand and electrostatic and chiral organic
forces molecules
Interaction based
Separation of hydrophilic
on ionic
Ionic Liquid and hydrophobic chiral
Chiralpak® IB exchange and
Stationary Phase molecules and
chiral
biomolecules
recognition
(d) Detectors
The most common HPLC detectors used are UV detectors because of the fact
that most of the compounds absorb in UV or visible region. They give specific
response to the class of compounds or particular compounds depending upon the
functional group of eluting molecules .The basis of working for optical detectors is the
change in intensity when a beam of electromagnetic radiation passes through the
detector flow cell. These detectors are of three different types: Fixed wave length
detectors, variable wavelength detectors and diode array detectors.
43
Public
CHAPTER1 ___
array detector, the sample is subjected to light of all wavelengths generated by the
lamp at once. The lights from emission source when collimated by an achromatic
lens system, the total light passes through the detector cell onto a holographic grating
and then falls onto a diode array which contains 100s of diodes. The chromatogram
can be produced using the UV wavelength that was falling on that particular diode at
the end of the run. DAD helps to see the response of the analyte at different
wavelengths in only single run and thus saves time and energy.. These detectors
acquire absorbance data over the entire UV-visible range, thus providing the analyst
with chromatograms at multiple, selectable wavelengths, spectra of the eluting peaks
and peakpurity.
Fluorescent detectors are the most selective, sensitive and specific than all
other HPLC detectors. Specific wavelength is used to excite and then emit light
signal in analyte atoms. They intensity of light is monitored continuously to quantify
the analyte concentration. Fluorescence is 10-1000 times sensitive than UV detector
for strong UV absorbing compounds. Even a single analyte in the cell can be
detected by the fluorescence detector. The system is easy to operate and relatively
stable.
A differential refractometer detector (DRI), commonly known as a refractive
index detector (RID), is a universal detector in High-Performance Liquid
Chromatography (HPLC) systems. It measures the refractive index of an analyte
relative to the solvent Differential refractometer detectors measure the difference
between the refractive index of the mobile phase alone and that of the mobile phase
containing compounds as it elutes from the column. Refractive index detectors are
used to detect non-UV absorbing compounds. Fluro-metric detectors are sensitive to
compounds that are inherently fluorescent or that can be converted to fluorescent
derivatives either by chemical transformation of the compound or by coupling with
fluorescent reagents at specific functionalgroups.
Electrochemical detectors in High-Performance Liquid Chromatography
(HPLC) offer high sensitivity and selectivity for compounds with electroactive
properties. Measure the potential difference between a reference electrode and an
indicator electrode immersed in the eluent. The potential change correlates with the
concentration of specific ions or [Link]-metric, or
Polarographic electrochemical detectors are useful for the quantitation of species that
can be oxidized or reduced at a working electrode. These detectors are selective,
44
Public
CHAPTER1 ___
sensitive, and reliable, but require conducting mobile phases free of dissolved
oxygen and reducible metal ions. Electrochemical detectors with carbon-paste
electrodes may be usedadvantageouslyto measure nano-gram (ng) quantities of
easily oxidized compounds, notably phenolsand catechol’s.
1) Normal-phasechromatography
In HPLC, if stationary phase is more polar than the mobile phase, it is termed
as normal-phase liquid chromatography. Polar bonded phases that have a diol,
cyano, diethyl-amino, amino, or di-amino functional groups are used as stationary
phase in normal-phase chromatography. Due to lower affinity of nonpolar
compounds to the stationary phases used, nonpolar compounds are elute first while
polar compounds are retained for longer time. Normal-phase chromatography is
widely applied for [Link] Phase Chromatography is a valuable
technique for separating polar compounds, offering high resolution and specificity
2) Reversed-phase chromatography
In HPLC, if stationary phase is less polar than the mobile phase, it is termed
45
Public
CHAPTER1 ___
as reversed-phase liquid chromatography. In this technique, C18, C8, Phenyl, and
cyano-propyl functional groups that chemically bonded to microporous silica
particles are used as stationary phase. Retention in reversed-phase chromatography
occurs by nonspecific hydrophobic interactions of the solute with stationary phase.
The ubiquitous application of reversed-phase chromatography arises from the fact
that practically all organic molecules have hydrophobic regions in their structures
and effectively interact with the stationary phase. It is estimated that over 65%
(possibly as high as 90%) of all HPLC separations are executed in the reversed-
phase mode. The rationale for this includes the simplicity, versatility, and scope of
the reversed-phase method. Reverse Phase Chromatography is a powerful and
versatile technique widely used in analytical chemistry for the separation and
analysis of a broad spectrum of compounds.
3) Ion-pairchromatography
46
Public
CHAPTER1 ___
often follows vary, method development often follows the series of steps
summarized in figure
Public
CHAPTER1 ___
these functional groups. As shown in Table 1.6, classes of molecules can be ordered
by their relative retention into a range or spectrum of chromatographic polarity from
highly polar to highly non-polar.
Water is a small molecule with a high dipole moment, it is a polar compound.
Benzene is an aromatic hydrocarbon, it is a non-polar compound. Molecules with
similar chromatographic polarity tend to be attracted to each other; those with
dissimilar polarity exhibit much weaker attraction, or may even repel each another.
Apart from chemical structure, number of compounds present in sample other kinds
of sample-related information that can be also important that includes molecular
weight of the analytes, pKa values of the compounds, sample solubility and sample
type (ionic or non-ionic). The choice of the mode of HPLC method should be made
principally from the properties of the sample that has been determined about
molecular weight (MW). On the basis of the solubility of the sample in polar or non-
polar solvents, mode of HPLC can be select as per below flow-chart (Figure: 1.11)
48
Public
CHAPTER1 ___
a) Selection of Stationaryphase:
The selection of the stationary phase in HPLC (High-Performance Liquid
Chromatography) is crucial for achieving optimal separation of the components in a
sample. The stationary phase is the material that is packed into the column, and its
properties (such as polarity, surface area, and particle size) directly influence the
retention and separation of [Link] selecting mode of HPLC, the choice of
the column (stationary phase) should be made after consideration of mode of
chromatography, column-to-column variability, and several other considerations.
The silica particles may be acquired in a variety of sizes, shapes, and degrees of
porosity. The activity or polarity of the silica surface may be modified selectively by
chemically bonding to it less polar functional groups (bonded phase) for the
application to any specific HPLC method. Polarity of different types stationary
phases. Sufficient time is also allowed for column equilibration before starting the
analysis.
Some other characteristics of stationary phase like particle shape, surface area,
particle size, bonding type, pore size and carbon load, surface chemistry shall also
consider at the time of method development which have considerably effect on
49
Public
CHAPTER1 ___
separation
Type of
Stationary Phase Stationary Polarity Application/Use
Phase
50
Public
CHAPTER1 ___
Surface Area:
The surface area of the stationary phase influences the number of adsorption sites
available for interaction with the [Link] surface area stationary phases provide
more surface interactions, improving separation efficiency and [Link] is
particularly important for small-particle stationary phases (e.g., <5 μm) which are
commonly used in modern HPLC for better separation.
Particle shape:
These particles offer a large surface area for interactions between the sample
and the stationary phase, promoting efficient [Link] of stationary
phase are either spherical or irregular. Irregular particles have provide higher surface
areas and higher carbon loads. Spherical particles provide higher efficiency, better
column stability, fast stabilization and lower back pressure compared to irregularly
shaped [Link] particle size, in combination with the shape, plays a major role
in efficiency, resolution, and pressure buildup in the [Link] shape of the
particles impacts the flow dynamics, surface area for interactions, and the efficiency
of separation Refer Figure 1.12
Spherical Irregular
51
Public
CHAPTER1 ___
Particle size:
The particle size of the stationary phase determines the efficiency of the separation,
as well as the backpressure during the [Link] particles (e.g., 3–5 μm) provide
higher efficiency and better resolution, but they result in higher [Link]
particles (e.g., 10 μm) offer lower backpressure but may reduce [Link] column
back pressure and column efficiency (performance) are inversely proportional to the
square o the particle [Link] size affects back-pressure and the separation
efficiency of [Link] particle sizes for HPLC/UPLC column packing are
represented in Figure 1.13.
Bonding type:
Bonding refers to the way the stationary phase is chemically modified or treated to
improve selectivity and [Link]: Used in normal-phase HPLC for
separating highly polar [Link] stationary phases (e.g., C18, C8) are used
in reverse-phase HPLC. The bonding of hydrocarbon chains (such as C18) to silica
reduces the interaction of the stationary phase with water, making it suitable for
reverse-phase separations.
Pore size:
The pore size of the stationary phase is an important characteristic for separating large
molecules or [Link] pore sizes (e.g., 100–300 Å) are typically used for
separating small to medium-sized [Link] pore sizes (e.g., >300 Å) are used for
the separation of large molecules like proteins, polymers, and other [Link]
52
Public
CHAPTER1 ___
size of 150 Å or less is chosen for samples with molecular weight less than 2000 and pore
size 300Å or greater for samples with molecular weight greaterthan 2000. Larger pores
allow larger solute molecules to be retained through maximum exposure to the surface
area of particles. Refer Figure 1.14
Carbon load:
Higher carbon load means more carbon chains are present on the column,
which generally leads to higher retention of hydrophobic compounds. This can
improve the resolution .A lower carbon load can lead to shorter retention times but
may reduce the column's ability to separate hydrophobic compounds [Link]
carbon load is the amount of bonded phase attached to the base material, expressed
in percentage of carbon. Refer Figure 1.14.
Surface Chemistry
The surface chemistry of the stationary phase affects how it interacts with
analytes. For example:Hydrophobic phases (like C18) interact primarily through van
der Waals forcesandhydrophobic [Link] phases (like silica) interact
through hydrogen bonding, dipole-dipole interactions, and polar
[Link], such as endcapping (the chemical modification of the
53
Public
CHAPTER1 ___
stationary phase surface to reduce residual silanol groups), can improve stability and
reduce unwanted interactions.
The efficiency and resolution of the stationary phase are determined by how well the
analytes are separated based on their affinity for the stationary [Link]-efficiency
stationary phases are characterized by narrow particle size distributions and minimal
tailing in [Link]-resolution stationary phases enable the separation of closely eluting
compounds by maximizing differences in interaction with the stationary phase.
The stationary phase choice should be aligned with the sample’s chemical properties
and the desired separation goals for achieving optimal separation, efficiency, and
resolution in HPLC analysis
Characteristic Explanation
Polarity Determines the interaction with analytes (non-polar vs polar)
Surface Area Affects the capacity and efficiency of the column
Influences resolution and backpressure (smaller particles =
Particle Size
higher resolution)
Alters the selectivity and stability (e.g., C18, Cyanopropyl,
Bonding Type
Silica)
Pore Size Affects the separation of large vs small molecules
Resistance to degradation under various conditions (pH,
Chemical Stability
temperature)
Determines how analytes interact with the stationary phase
Surface Chemistry
(hydrophobic, hydrogen bonding)
Ability to distinguish between analytes based on their
Selectivity
properties
Efficiency and
Affects the sharpness and separation between peaks
Resolution
Compatibility with
Ensures optimal performance with chosen solvents
Mobile Phase
Public
CHAPTER1 ___
A mathematical calculation of the behaviour of chromatographic column efficiency is
obtained from the Van Deemter equation. he Van Deemterequation is a mathematical model
that describes the relationship between column efficiency (measured as the number of
theoretical plates, NNN) and various factors such as the flow rate of the mobile phase and
properties of the column. It is widely used in chromatography to optimize the conditions for
best separation.
HETP = A + (B / u) + Cu
Where:
A Eddy diffusion
B Longitudinal diffusion
C Resistance to mass transfer
u Average mobile phase velocity
Eddy diffusion occurs due to irregularities in the packing of the stationary phase,
leading to multiple flow paths and peak broadening in chromatography. It is a key factor in
reducing column efficiency, and minimizing it involves using smaller particles and ensuring
uniform packing. Reducing eddy diffusion improves chromatographic resolution and leads to
sharper peaks, enhancing the overall separation [Link] eddy diffusion (A),
indicates the multitude of pathways by which a component finds its way through the column.
In a poorly packed column, the retention times of molecules of the same components can
drastically depending on numerous flows that could be taken. This affects leads in band
55
Public
CHAPTER1 ___
broadening. The mobile phase at moderate to high flow rate the zone broadening is higher. At
low flow rate, the molecules of a component are not significantly dispersed by multi-
channelling. The longitudinal diffusion (B/v) indicates band-broadening process that is
inversely related to mobile phase velocity. At high flow rate analyte spend shorter time on
column hence diffusion is less. The mass transfer coefficient Cv indicates equilibrium of an
anlyte established between mobile and stationary phase. Eddy diffusion is more significant in
columns with larger stationary phase particles because these particles create larger gaps
between them, increasing the likelihood of multiple flow paths. Smaller particles reduce the
effect of eddy diffusion because they create a more uniform packing and more direct paths
for the solute molecules. Independence from Flow Rate: The A term (eddy diffusion) in the
Van Deemter equation is independent of the mobile phase flow rate uuu. This means that,
unlike longitudinal diffusion or mass transfer, the influence of eddy diffusion doesn't change
with flow rate. At high flow rate, there is less time for equilibrium to take place and
contribution to be 8broadening effect is observed. Van Deemter plot shown in Figure1.15
b) Selection of mobilephase
Public
CHAPTER1 ___
single solvents, as well as mixtures of miscible solvent can be placed in order of elution
strength.
Selected solvent should have low viscosity, be compatible with the detection
system, be easily available in pure form, and, if possible, have low flammability and
toxicity. UV cut-off values of solvents are also important consideration from the
standpoint of detection. The term polarity concerns the ability of a sample or solvent
molecule to interact by combination of dispersion, dipole, hydrogen boding, and
dielectric interactions. The combination of these four intermolecular attractive forces
constitutes the solvent polarity. Polarity is measure strength of solvent that affected
selectivity.
The changes in selectivity may be affected by making use of the following solvent
properties:
Proton acceptors: amines, ethers, sulfoxides, amides, esters, andalcohols.
Proton donors: alcohols, carboxylic acids, phenols, andchloroform.
Large dipole solvents: methylene chloride, nitrites, sulfoxides, and ketones.
Application of reagents such as buffers, ion-pairing reagents, or other modifiers
(such as triethylamine) to the mobile phase is carried out to improve reproducibility,
selectivity, or peak shape. Buffers are used primarily to regulate the pH and the acid-
base equilibrium of the solute in the mobile phase. They may also be utilized to
affect the retention times of ionisable compounds. The buffer capacity should be at
maximum and should not vary in the pH range of 2 to 8 commonly used in HPLC.
The buffers should be soluble, stable, inert to analytes and compatible to the
detector.
By employing gradient elution mode, required % of the organic phase can be
estimated rapidly. For aqueous sample, the best way to start is with gradient reversed
phase chromatography. Gradient run can be started with 5 to 10% organic phase
(acetonitrile or methanol) in the mobile phase and can be increased up to 90% within
30 to 40 minutes. Separation can be optimized by changing the initial mobile phase
57
Public
CHAPTER1 ___
composition and the slope of the gradient according to the chromatogram obtained
from the previous run. The initial mobile phase composition can be estimated on the
basis of where the compounds of interest were eluted at what proportion of organic
and aqueous component of the mobile phase.
1. Consider the polarity of the analyte and stationary phase to determine whether
normal-phase or reversed-phase chromatography is more suitable.
2. Choose solvents that are compatible with the nature of the analytes and their
solubility in the chosen mobile phase.
3. Adjust the pH if necessary, especially for ionizable analytes.
4. Use a gradient elution method when dealing with complex mixtures to improve
separation and reduce elution times.
5. Test compatibility with the detection system (e.g., UV transparency, low volatility
for mass spectrometry).
58
Public
CHAPTER1 ___
Maximize sensitivity by selecting the wavelength corresponding to the analyte's
absorption maxima (λmax). For complex mixtures, choose a wavelength where the
analyte absorbs strongly and minimize interference from other components. For trace-
level detection, use a narrow wavelength to reduce noise and enhance selectivity
Alterative detectors are required when sample have low or no UV absorbance.
d) Diluentselection:
Diluent selection is an important aspect of chromatography, as it plays a
significant role in ensuring that the sample is appropriately prepared for injection
into the chromatographic system. The diluent should be chosen carefully to avoid
interference with the analyte, minimize sample degradation, and ensure compatibility
with the mobile phase and detection system. Diluent for sample preparation shall be
selected at initial stage of development on the basis of solubility of the sample.
However, optimization of the diluent is based on its extraction efficiency, effect on
peak symmetry, peak interference in estimation and stability of analyte in diluent.
59
Public
CHAPTER1 ___
parameters that are considered for good chromatographic condition and being
optimized are:
All above terms are explained according to Figure 1.18 and Figure 1.19 as below:
Figure 1.18: Explanation for Resolution, Theoretical plates, Capacity factor and
Selectivity
1. Resolution (R)
Resolutionis a critical factor in HPLC that determines how well two analytes can
be separated. Higher resolution is essential for accurate and precise analysis,
particularly in complex mixtures. By adjusting various chromatographic conditions,
resolution can be optimized to achieve the best possible separation.
Where, t2 and t1 are the retention times of the two components, and W 2 and
W1 are the corresponding widths at the bases of the peaks obtained by extrapolating
the relatively sides of the peaks to horizontal the baseline. Where electronic
integrators are used, it may be convenient to determine the resolution, R, by the
following equation.
Where by W1h/2 and W2h/2 the width at half-height of corresponding [Link] better
60
Public
CHAPTER1 ___
separation, the ideal value of R is 1.
61
Public
CHAPTER1 ___
2. Theoretical plates(N)
The number of theoretical plates N is a measure of the column efficiency. It
is expressed by followingequation.
Where t is retention time of the peak and W is the width for the peak. W h/2 is width
at half-height of the peak. If the value of theoretical plates is higher than 4000 is
indicating good column [Link] more theoretical plates a column has, the
better its ability to separate compounds. A higher number of theoretical plates
indicates greater resolution and efficiency of the chromatographic process.
3. Tailing factor(T)
The tailing factor (T) is a measure of peak symmetry. It is unity for perfectly
symmetrical peak to value of 1.0 and its value increases as tailing becomes more
pronounced. It is determined by following formula.
T=a+b
2a
W0.05 is peak width at 5% height from the baseline and f is leading edge of the peak
In general, value of tailing factor should be less than 1.5
Peak Asymmetry
A =b
a
62
Public
CHAPTER1 ___
4. Capacity Factor(k′)
The capacity factor (k′) in chromatography is a measure of how well a
compound is retained in a chromatographic column relative to the mobile phase. It is
used to evaluate the interaction between a solute (analyte) and the stationary phase.
Essentially, the capacity factor tells you how much longer an analyte spends
interacting with the stationary phase compared to the mobile phase.
Capacity factor is the ratio of the reduced retention volume to the dead
volume, which is a measure of how well the peak of sample molecule is retained by
a column during an isocratic separation. It is determined by using followingformula.
The capacity factoris a key parameter for evaluating the retention characteristics of
analytes in chromatography. It helps assess the interaction between the analyte and the
stationary phase and is essential for optimizing separation, retention time, and overall
efficiency of the chromatographic process.
63
Public
CHAPTER1 ___
Where by t0 is the void volume of the column and t1 is the retention time of the
corresponding peak. The ideal value of k′ ranges from 2-10.
5. Selectivity(α)
Where by t0 is the void volume of the column and t 1 and t2 are the retention times of the
corresponding peak. The ideal value of should not be less than 1.
Selectivity is a measure of how well a chromatographic method can separate different
components in a mixture. A high selectivity means that the method can distinguish
between compounds effectively, leading to better separation.
1.4.1. CONCEPT
Forced degradation is the process of subjecting pesticides compounds to extreme
chemical and environmental condition to determine product breakdown levels and
preliminary degradation kinetics. They are used to facilitate the development of
analytical methodology, to gain a better understanding of active ingredient (AI) and
finished product (FP) stability, and to provide information about degradation pathways
and degradation products.
64 Public
CHAPTER1 ___
1.4.2 STRESSCONDITIONS
Thermal, hydrolysis (acid and base), oxidation and photo-degradation are
commonly used in stress study mechanisms. Degradation level can be achieved by
selecting suitable concentration of acid, base and oxidizing agent, applying combination
of stress (e.g., degradation media along with temperature) and exposure time. The
generally recommended degradation varies between 5-20% degradation.
65 Public
CHAPTER1 ___
injected after filter through syringe filter to save the column silica from damage.
Alcoholic acid agent or alcoholic base agent can also be used for compounds, which are
insoluble inwater.
66 Public
CHAPTER1 ___
component peak and all unknown impurities should be well separated from known
impurities. Therefore, the analytical method which has capability to resolve known and
unknown impurities from main principle peak of component is known as stability
indicatingmethod.
1.5.1 CONCEPT
Evaluation of a method is to ensure that its performance is suitable for the analysis being
carried out is known as method [Link] Method Validation is a process
that ensures an analytical method (used for testing or analysis in laboratories) is reliable,
accurate, and consistent for its intended purpose. It involves confirming that the method
is fit for its intended use in terms of accuracy, precision, sensitivity, specificity, and
67 Public
CHAPTER1 ___
68 Public
CHAPTER1 ___
Some type of system suitability must be done which demonstrate that the analytical
69 Public
CHAPTER1 ___
70 Public
CHAPTER1 ___
The objective is also extent to verify that the method will provide the same results in
different laboratories (ruggedness).
The Limit of Detection (LOD)and Limit of Quantitation (LOQ) are both important
concepts in analytical chemistry and laboratory testing, particularly when assessing the
sensitivity of a method to detect and measure very low concentrations of a substance.
Limit of Detection also known as Detection Limit (DL) is the point at which a measured
value is larger than the uncertainty associated with [Link] detection limit of an analytical
method is the lowest concentration of an analyte (substance) that can be reliably
detected but not necessarily quantified measured accurately
Limit of Quantitation also known as Quantitation Limit (QL) of an analytical method is
the lowest amount of analyte in a sample which can be quantitated with suitable
precision and accuracy. The quantitation limit is the minimum injected amount that
produces quantitative measurements in the target matrix with acceptable precision.
Some common methods for the estimation of LOD and LOQ are:
a) Visualevaluation
b) Signal-to-noiseratio
c) Standard deviation method based on calibration curve
d) Method of least square regression analysis
e) Blank or background measurement method
f) Spike sample method approach
71 Public
CHAPTER1 ___
a) Visual evaluation: This method may be used for non-instrumental methods but may
also be used with instrumental methods. LOD is determined by the analysis of samples
with known concentration of analyte and by establishing the minimum level at which the
analyte can be reliably detected, and for LOQ the minimum concentration level at which
analyte can reliably quantified with acceptable accuracy andprecision.
b) Signal-to-noise Ratio: This approach can only be applied to analytical procedures that
exhibit baseline noise. Determination of Signal-to-noise ratio is performed by comparing
measured signal from samples to with the low concentration of analyte with those of
blank samples establishing the minimum concentration at which the analyte can be
reliably detected is the LOD and the minimum concentration at which the analyte can be
reliably quantified is the [Link], the LOD is defined as the concentration at
which the signal-to-noise ratio (S/N) is 3:1. The LOQ is defined as the concentration at
which the signal-to-noise ratio is 10:1. . Refer Figure1.22
Steps
72 Public
CHAPTER1 ___
This method involves calculating the standard deviation of the response (signal) and the slope of
the calibration curve.
Where:
Where:
Steps:
Construct a calibration curve by plotting the analyte concentration versus the signal.
Calculate the standard deviation of the response from several blank samples (or low-
concentration standards).
Calculate the slope of the calibration curve.
Apply the formulas for LOD and LOQ.
73 Public
CHAPTER1 ___
This method involves preparing a series of standard solutions with known concentrations of
the analyte and constructing a calibration curve.
The LOD and LOQ are estimated based on the extrapolation of this curve and the noise of
the system.
Steps:
This method involves fitting a regression model (typically a linear regression) to the data
from a series of standards of varying [Link] the regression model is
established, you can determine the noise level and calculate the LOD and LOQ based on
the regression parameters (slope and intercept).
Steps:
74 Public
CHAPTER1 ___
This method estimates the LOD and LOQ by measuring the blank (background noise)
response in the absence of analyte. The LOD and LOQ are then determined based on the
number of standard deviations above the blank.
Steps:
Measure the signal of the blank samples multiple times to estimate the baseline noise
(standard deviation of the blank).
Calculate the LOD and LOQ based on the standard deviation of the blank using the
following formulas:
These formulas assume that the analyte signal is distinguishable from the blank noise.
In this approach, known amounts of analyte are spiked into blank samples (or samples
with a known analyte concentration) to simulate real-world [Link] LOD and LOQ
are determined by observing how well the method detects and quantifies the spiked
analyte at low concentrations.
Steps:
75 Public
CHAPTER1 ___
76 Public
CHAPTER1 ___
Both linearity and range studies are critical for ensuring the validity and reliability of an
analytical method. Linearity confirms that the method produces a proportional response
to changes in concentration, while the rangestudy ensures that the method is accurate and
precise over the concentration span expected in real-world samples. Together, these
studies ensure that the analytical method can be confidently used for quantitative analysis
in a wide variety of applications.
6) Accuracystudy
The accuracy of the analytical method is the closeness of agreement between the
value which is accepted either as a conventional true value or an accepted reference
value, and the value found. It is essential to ensure that the method is capable of
providing reliable, truthful results. The accuracy of an analytical method is the extent to
which test results obtained by the method and the true value agree. Refer Figure 1.24
The true value for accuracy assessment can be assessed by following ways:
77 Public
CHAPTER1 ___
7) Robustnessstudy
The robustness of an analytical method is a measure of its capacity to remain
unaffected by small, but deliberate, variations in method parameters and provides an
indication of its reliability during normal usage.
Robustness study examines the effect of operational parameters on the analysis
results. For the determination of a method’s robustness, method parameters like pH,
flow rate, column temperature, column lot or mobile phase composition, are varied
within a realistic range, and the quantitative influence of the variables is determined. If
the results of this parameter are within a previously specified tolerance, the parameter is
said to be within the method’s robustness range.
8) Solution stabilitystudy
Many solutes readily decompose prior to chromatographic investigations, for
example, during the preparation of the sample solutions, extraction, clean-up, phase
transfer or storage of prepared vials (in refrigerators or in an auto-sampler). Under these
circumstances, method validation should investigate the stability of the analytes and
standards in solution form (in analytical preparations). The standard and sample
preparations are stored up to specified period at specified temperature and its stability is
78 Public
CHAPTER1 ___
Asolution stability study is critical for ensuring that analytical solutions, reagents, or
standards remain stable under normal storage and handling conditions over time. By
systematically assessing changes in concentration, composition, and physical properties,
it is possible to determine the best storage conditions and optimize the shelf life of
solutions, ensuring that analytical results remain consistent and reliable.
1.5.3 PRIOR STEPS OFVALIDATION
Before starting the formal validation of an analytical method, there are several
prior steps that need to be performed to ensure the method is suitable for its intended
purpose and can provide reliable and reproducible results. These preliminary steps
the groundwork for a successful method validation [Link] define the
purpose of the method and the specific requirements for validation. This includes
understanding the intended use of the method (e.g., quantification, detection, and
identification, the regulatory requirements, and the acceptable performance
criteria.
79 Public
CHAPTER1 ___
The history of Karl Fischer Titration (KFT) is closely tied to the work of Karl Fischer, a
German chemist who developed the method in the early 20th century. His work
revolutionized the analysis of moisture content in various materials and set the stage for a
widely used and precise technique still in use today.
Karl Fischer was born in 1901 in Germany and pursued studies in chemistry. He
eventually worked in various industrial and academic settings, where his work focused on
analytical chemistry.
Fischer's interest in moisture analysis was sparked by the need for a more precise method
to determine water content in substances, which was a critical parameter for a variety of
industries.
In 1935, Fischer, while working at the Dr. Paul Fischer & Co. (a company in Berlin that
focused on analytical chemistry), developed a chemical titration method for determining
moisture content in substances. This method was based on the reaction of iodine with
waterin a solvent, which allowed for the quantitative measurement of water in a sample.
The key to Fischer's titration method was a two-step reaction where iodine (I₂) reacted
with water (H₂O), producing hydroiodic acid (HI) and iodic acid (HIO₃). Fischer
carefully designed the method to prevent interference from other substances, ensuring
that it was both sensitiveand specific to water.
The initial paper published by Karl Fischer in 1935 described this titration method, which
became known as Karl Fischer Titration. The method was initially applied to substances
like oils and petroleum products to measure their moisture content.
The KF titration was first devised by the German chemist, Karl Fischer, to find the water
content of liquid sulfur dioxide. Since other commonly-used methods were not suitable,
he used the Bunsen reaction shown below.
80 Public
CHAPTER1 ___
He used a new reagent including sulfur dioxide, iodine and pyridine, in a methanol
solution, giving rise to the following equation:
At end point the color changed from yellow to brown. Thus he performed the first
volumetric KF titration. This was refined by American researchers later in 1939 and the
two steps were modified by changing the molar ratio of water to iodine:
The final version came in 1984 when it was known that pyridine was not part of the
reactants, but only a base (represented as B):
The reaction converts the reagent into an alkyl sulfite which is then oxidized by the
iodine, if water is present. The alcohol is essential for proper stoichiometric ratios to be
preserved, at about 50%, but other bases can be used instead of the pyridine – which is
important because of its pungent smell and toxicity which has led to its replacement by
non-toxic imidazole and other bases.
This has another advantage, in that these are generally more basic and so increase the rate
of the reaction leading to a quicker reaction and increased stability of the end point.
81 Public
CHAPTER1 ___
The KF reaction is based upon the oxidation of sulfur dioxide by iodine with the
consumption of water in a buffered solution:
The titration reaches its endpoint when the titrating agent has achieved a volume
sufficient to react the total amount of water in the sample. Water and iodine are used up
in an equimolar ratio.
The color change that signals the end point of the reaction is caused by the detection of
excess iodine at the double platinum electrode which acts as the indicator, following the
consumption of all the water in the sample which leads to the cessation of the reaction.
The water content is then calculated from the amount of reagent added.
The titration cell must be kept from atmospheric moisture and the sample must not react
with the KF reagent. For instance, ketones and aldehydes must be titrated in methanol-
free solvents because otherwise they react with methanol, forming water, which results in
a falsely high water concentration and a vanishing end point.
The reaction is sensitive to pH and therefore a buffer must be used if strongly acidic or
basic samples are to be titrated.
82 Public
CHAPTER1 ___
The original method, known as volumetric Karl Fischer titration, used a solution of
iodine in methanol and sulfur dioxide. Involves the addition of a liquid reagent (titrant) to
the sample until all the water has reacted. The endpoint is typically detected using a
change in electrical conductivity or a color change, indicating that the reaction is
[Link] amount of titrant consumed corresponds to the water content in the sample.
In the 1950s, the coulometric Karl Fischer titration method was introduced. This
version was especially useful for measuring small quantities of [Link] this
technique, the iodine is generated electrochemically by applying a current to the
electrolyte solution, where the iodine is produced in situ. The amount of electricity
required to generate iodine corresponds to the water content.
Karl Fischer Titration is an essential tool in various industries for moisture analysis
due to its precision, reliability, and sensitivity. Common applications include:
1. Pharmaceuticals:
83 Public
CHAPTER1 ___
Water content in oils, fuels, and other petrochemical products is critical for
quality control and to prevent corrosion, microbial growth, or unwanted chemical
reactions.
Monitoring water levels in cosmetics and personal care formulations to ensure the
quality and shelf life of the products.
6. Environmental Analysis:
1. High Accuracy: Provides highly accurate and reproducible results for moisture
determination.
2. Wide Range of Samples: Suitable for liquids, solids, gases, and even viscous
substances.
3. Sensitivity: Able to measure very low amounts of water content, from a few
micrograms to several percent.
84 Public
CHAPTER1 ___
4. Specificity: The method is selective for water, meaning that it does not interfere with
other substances in the sample
85 Public