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Chapter One - Five

Centrifugation is a critical technique in biochemistry and molecular biology for isolating cells and macromolecules using centrifugal force to separate particles based on size and density. The document details the principles of centrifugation, including the Stokes equation and the classification of centrifuges, as well as the applications of differential and density gradient centrifugation methods. It also discusses the properties of ideal density gradient media and their impact on the separation process.

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0% found this document useful (0 votes)
4 views31 pages

Chapter One - Five

Centrifugation is a critical technique in biochemistry and molecular biology for isolating cells and macromolecules using centrifugal force to separate particles based on size and density. The document details the principles of centrifugation, including the Stokes equation and the classification of centrifuges, as well as the applications of differential and density gradient centrifugation methods. It also discusses the properties of ideal density gradient media and their impact on the separation process.

Uploaded by

James Ilori
Copyright
© All Rights Reserved
We take content rights seriously. If you suspect this is your content, claim it here.
Available Formats
Download as PDF, TXT or read online on Scribd

CHAPTER ONE

INTRODUCTION
1.1 Meaning Centrifugation

Centrifugation is one of the most important and widely applied research techniques in
biochemistry, cellular and molecular biology, evaluation of suspensions and emulsions in
pharmacy and in medicine. Current research and clinical applications rely on isolation of cells,
subcellular organelles, and macromolecules, often in high yields. A centrifuge uses centrifugal
force (g- force) to isolate suspended particles from their surrounding medium on either a batch
or a continuous flow basis (Rickwood and Graham 2017).

Many particles or cells in a liquid suspension, given time, will eventually settle at the bottom
of a container due to gravity. However, the length of time required for such separations is
impractical. Other particles, extremely small in size, will not separate at all in solution, unless
subjected to high centrifugal force. When a suspension is rotated at a certain speed or
revolutions per minute (RPM), centrifugal force causes the particles to move radially away
from the axis of rotation. The force on the particles (compared to gravity) is called Relative
Centrifugal Force (RCF). For example, an RCF of 500 x g indicates that the centrifugal force
is 500 times greater than earthly gravitational force.

Centrifugation is a process which involves the use of the centrifugal force for the sedimentation
of heterogeneous mixtures with a centrifuge, used in industry and in laboratory settings. This
process is used to separate two immiscible liquids. More-dense components of the mixture
migrate

Centrifugation is a process which involves the use of the centrifugal force for the sedimentation
of heterogeneous mixtures with a centrifuge, used in industry and in laboratory settings. This
process is used to separate two immiscible liquids. More-dense components of the mixture
migrate away from the axis of the centrifuge, while less-dense components of the mixture
migrate towards the axis. Pharmacists, chemists and biologists may increase the effective
gravitational force on a test tube so as to move rapidly and completely cause the precipitate
("pellet") to gather on the bottom of the tube. The remaining solution is properly called the
"supernate" or "supernatant liquid". The supernatant liquid is then either quickly decanted from
the tube without disturbing the precipitate, or withdrawn with a Pasteur pipette (Rickwood,
Ford, and Steensgaard 2019).

1
1.2 Basics of Centrifugation

The earth's gravitational force is sufficient to separate many types of particles over time. A tube
of anticoagulated whole blood left standing on a bench top will eventually separate into plasma,
red blood cell and white blood cell fractions. However, the length of time required precludes
this manner of separation for most applications. In practice, centrifugal force is necessary to
separate most particles. In addition, the potential degradation of biological compounds during
prolonged storage means faster separation techniques are needed. The rate of separation in a
suspension of particles by way of gravitational force mainly depends on the particle size and
density. Particles of higher density or larger size typically travel at a faster rate and at some
point, will be separated from particles less dense or smaller. This sedimentation of particles,
including cells, can be explained by the Stokes equation, which describes the movement of a
sphere in a gravitational field. Equation (1) calculates the velocity of sedimentation utilizing
five parameters (Rickwood., 2012).

V= d2(p-L)3g 18n .........................................(1)

v = sedimentation rate or velocity of the sphere

d = diameter of the sphere p = particle density

L = medium density n = viscosity of medium

g = gravitational force

From the Stokes equation five important behaviors of particles can be explained:

• The rate of particle sedimentation is proportional to the particle size.

• The sedimentation rate is proportional to the difference in density between the


particle and the medium.

• The sedimentation rate is zero when the particle density is the same as the medium
density.

• The sedimentation rate decreases as the medium viscosity increases.

• The sedimentation rate increases as the gravitational force increases.

2
Table 1. Classes of Centrifuges and Their Applications

Centrifuge Classes

Low – High – speed speed Ultra/micro - ultra

Maximum Speed
10 28 100 / 150
(rpm x 103)

Maximum RCF
7 100 800 / 900
(x103)

Pelleting Applications

Bacteria Yes Yes (Yes)

Animal and plant cells Yes Yes (Yes)

Nuclei Yes Yes (Yes)

Precipitates Some Most (Yes)

Membrane fractions Some Some Yes

Ribosomes / Polysomes - - Yes

Macromolecules - - Yes

Viruses - Most Yes

(-) Can be done but not necessarily used for this purpose

RCF is dependent on the speed of rotation in rpm and the distance of the particles from the
center of rotation. When the speed of rotation is given in rpm (Q) and the distance (r) is
expressed in centimeters, RCF can be calculated by using the formula in Figure 2.

RCF = 11.17 x Rmax (RPM/1000)2 (2) Formula for relative centrifugal force (RCF).

3
1.3 Principles of Centrifugation

Particles having a size above 5µm sediment at the bottom due to gravitation force. Such a
suspension can be separated by simple filtration techniques. If the size of particles is less than
5µm they undergo Brownian motion. In such suspension a stronger centrifugal force is applied
to separate the particles.

Considering a body of mass m rotating in a circular path of radius r at a velocity of v. The force
acting on the body in a radial direction is given by:

F = mv2/r

Where F = centrifugal force, m = mass of body, v = velocity of the body, r = radius of circle of
rotation.

The gravitational force acting upon the same body G = mg

Where, G = gravitational force g = acceleration due to gravity

The centrifugal effect is the ratio of the centrifugal force and gravitational forces so that

C = F/G = mv2/mgr = v2/gr (3)

Since, v = 2π r n where n = speed of rotation (r.p.m.)

C = F/G = (2π r n) 2/g r = 4π2 r2n2

= 2π2/g D n2 = kD n2 (4)

where, k = 2π2/g = constant

D = maximum diameter of the centrifuge

D can be measured from the center of the centrifuge to the free surface of the liquid or to the
tip of the centrifuge tube.

From the equation C = kDn2 it can be concluded that

Centrifugal effect ∝ diameter of centrifuge Centrifugal effect ∝ (speed of rotation)2

4
Figure 1: Illustration of the principle of Centrifugation

Source: An Introduction to Centrifugation, BIOS Scientific Publishers (20219).

5
CHAPTER TWO
2.0 Applications of Principle of Centrifugation

If the particles of suspensions are very small then high centrifugal effect will be required to
separate the particles. To separate such suspensions the size of the centrifuge is kept smaller
but it is rotated at very high speed (rpm). If a large amount of material is to be separated and a
low centrifugal effect is sufficient to separate the suspension then the diameter (D) of the
centrifuge is increased and speed (n) is kept low. (Suwanvecho et al., 2024)

2.1 Types of Centrifugation Separations

There are two types of centrifugal techniques for separating particles, differential
centrifugation and density gradient centrifugation. Density gradient centrifugation can further
be divided into rate-zonal and isopycnic centrifugation.

• Differential Centrifugation

The simplest form of separation by centrifugation is differential centrifugation, sometime


called differential pelleting (Figure 1). Particles of different densities or sizes in a suspension
will sediment at different rates, with the larger and denser particles sedimenting faster. These
sedimentation rates can be increased by using centrifugal force. A suspension of cells subjected
to a series of increasing centrifugal force cycles will yield a series of pellets containing cells of
decreasing sedimentation rate. Particles of different densities or size will sediment at different
rates with the largest and most dense particles sedimenting the fastest followed by less dense
and smaller particles. (Hirohata et al., 2024)

Differential pelleting is commonly used for harvesting cells or producing crude subcellular
fractions from tissue homogenate. For example, a rat liver homogenate containing nuclei,
mitochondria, lysosomes, and membrane vesicles that is centrifuged at low speed for a short
time will pellet mainly the larger and more dense nuclei. Subsequent centrifugation at a higher
centrifugal force will pellet particles of the next lower order of size (e.g., mitochondria) and so
on. It is unusual to use more than four differential centrifugation cycles for a normal tissue
homogenate. Due to the heterogeneity in biological particles, differential centrifugation suffers
from contamination and poor recoveries. Contamination by different particle types can be
addressed by resuspension and repeating the centrifugation steps (i.e., washing the pellet).
(Henrickson, 2024)

6
Figure 2. Differential Centrifugation

Source: Methods for the design and analysis of analytical ultracentrifugation. Current
Protocols in Molecular Biology (2019).

7
• Density Gradient Centrifugation

Density gradient centrifugation is the preferred method to purify subcellular organelles and
macromolecules. Density gradients can be generated by placing layer after layer of gradient
media such as sucrose in a tube with the heaviest layer at the bottom and the lightest at the top
in either a discontinuous mode. The cell fraction to be separated is placed on top of the layer
and centrifuged. Density gradient separation can be classified into two categories, rate – zonal
(size) separation and isopycnic (density) separation. (Henrickson, 2024)

• Rate-Zonal Centrifugation

In rate-zonal centrifugation the problem of cross-contamination of particles of different


sedimentation rates may be avoided by layering the sample as a narrow zone on top of a density
gradient. In this way the faster sedimenting particles are not contaminated by the slower
particles as occurs in differential centrifugation. However, the narrow load zone limits the
volume of sample (typically 10%) that can be accommodated on the density gradient. The
gradient stabilizes the bands and provides a medium of increasing density and viscosity.
(Hirohata et al., 2024)

8
Figure 3. Rate-Zonal Centrifugation

Source: Methods for the design and analysis of analytical ultracentrifugation. Current
Protocols in Molecular Biology (2018).

9
Sample is layered as a narrow zone on the top of a density gradient (3B). Under centrifugal
force, particles move at different rates depending on their mass (3C). The speed at which
particles sediment depends primarily on their size and mass instead of density. As the particles
in the band move down through the density medium, zones containing particles of similar size
form as the faster sedimenting particles move ahead of the slower ones. Because the density of
the particles is greater than the density of the gradient, all the particles will eventually form a
pellet if centrifuged long enough. (Hirohata et al., 2021)

• Isopycnic Centrifugation

In isopycnic separation, also called buoyant or equilibrium separation, particles are separated
solely on the basis of their density. Particle size only affects the rate at which particles move
until their density is the same as the surrounding gradient medium. The density of the gradient
medium must be greater than the density of the particles to be separated. By this method, the
particles will never sediment to the bottom of the tube, no matter how long the centrifugation
time. (Hirohata et al., 2024)

10
Figure 4. Isopycnic Centrifugation

Source: Methods for the design and analysis of analytical ultracentrifugation. Current
Protocols in Molecular Biology (2019).

11
Starting with a uniform mixture of sample and density gradient (4A) under centrifugal force,
particles move until their density is the same as the surrounding medium (4B).

Upon centrifugation, particles of a specific density sediment until they reach the point where
their density is the same as the gradient media (i.e., the equilibrium position). The gradient is
then said to be isopycnic and the particles are separated according to their buoyancy. Since the
density of biological particles is sensitive to the osmotic pressure of the gradient, isopycnic
separation may vary significantly depending on the gradient medium used. Although a
continuous gradient may be more suited for analytical purposes, preparative techniques
commonly use a discontinuous gradient in which the particles band at the interface between
the density gradient layers. This makes harvesting certain biological particles (e.g.,
lymphocytes) easier. (Suwanvecho et al., 2024)

2.2 Selection of Suitable Density Gradient Medium

The primary function of density gradient centrifugation is to separate particles, either on the
basis of their buoyancy density or their rate of sedimentation. For rate-zonal separations, the
function of the gradient is to provide a gradient of viscosity which improves particle resolution
while stabilizing the column from convection currents. For isopycnic separations, the important
feature is that the maximum density of the gradient media is higher than that of the particles.
(Suwanvecho et al., 2024)

2.2.1 Properties of Ideal Density Gradient Media

An ideal density gradient media should have sufficient solubility to produce the range of
densities required; should not form solution of high viscosity in the desired density range;
should not be hyperosmotic or hypoosmotic when the particles to be separated are osmotically
sensitive; solutions of the gradient should be adjustable to the pH and the ionic strengths that
are compatible with the articles being separated; should not affect the biological activity of the
sample; should be nontoxic and not metabolized by cells; not interfere with assay procedures
or react with the centrifuge tubes; should exhibits a property that can be used as a measure of
concentration; should be easily removed from the purified product; autoclavable and possess
reasonable cost. No single compound can satisfy all of the above criteria. (Suwanvecho et al.,
2024) As shown in Table 2, a wide range of gradient media are used for the different types of
samples. Most media are capable of producing the range of densities required and being easily
removed from the particles of interest. The effect of osmolality on biological particles requires
special consideration. (Henrickson, 2024) The osmolality of most mammalian fluids is 290-
300 mOsm.4. This is the osmolality of balanced salt solutions (e.g., 0.85-0.9% NaCl) and most

12
common media. High osmolality solutions not only remove water from the interior of
membrane-bound particles, they also remove water bound to macromolecules like DNA. Loss
of water from cells will reduce their size and increase their density, thereby affecting their
buoyancy and rate of sedimentation. The osmotic effect on cells and macromolecules may be
reversible, though it is a possible source of error that should be avoided. (Hirohata et al., 2024)

Over the years, a variety of different compounds have been developed as density gradient
media in order to enhance the separation process and to overcome osmolality and viscosity
problems. There are five main classes of density gradient medium. These are Polyhydric
(sugar) alcohols, Polysaccharides, Inorganic salts, Iodinated compounds, Colloidal silica.
(Hirohata et al., 2024)

2.2.2 Polyhydric Alcohols

Polyhydric alcohols are considered nonionic gradient media. Some of the first centrifugation
techniques developed in the 1950s used sucrose in the purification of cell organelles. Sucrose
gradients are widely used for the rate-zonal separation of macromolecules and for the isopycnic
separation of viruses and cell organelles. (Hirohata et al., 2024) The advantages are

13
Table 2. Density Gradient Media Types and their Principle Uses

Gradient Medium Type Principle Uses

Polyhydric alcohols

Sucrose Organelles, membrane vesicles, viruses,


proteins, ribosomes, polysomes

Glycerol Mammalian cells (infrequent), proteins

Sorbitol Nonmammalian subcellular particles

Polysaccharides

Ficoll, polysucrose and dextrans Mammalian cells (sometimes in


combination with iodinated density
gradient media), mammalian subcellular
particles (infrequent)

Inorganic salts

CsCl DNA, viruses, proteins

Cs₂SO₄ DNA, RNA

KBr Plasma lipoproteins

Iodinated gradient media

Diatrizoate Mainly as a component of commercial


lymphocyte isolation media

Nycodez, Histoden™ Mammalian cells, organelles, membrane


vesicles, viruses

Iodixanol Mammalian cells, organelles, membrane


vesicles, viruses, plasma lipoproteins,
proteins, DNA

Colloidal silica media

Percoll Mammalian cells, organelles, membrane


vesicles (infrequent)

14
its stable nature, inertness, and low cost. The disadvantages lie in the fact that concentrated
solutions are viscous and hypertonic. Reagent-grade sucrose may be contaminated with RNA
ses or heavy metals and therefore are unsuitable for DNA and RNA purification. Glycerol
solutions are less dense than corresponding sucrose solutions. However, glycerol solutions of
the same density of sucrose solutions are much more viscous. Glycerol helps to preserve the
activity of certain enzymes and it can be removed through vacuum. (Suwanvecho et al., 2024)

Examples are: Sucrose Organelles, membrane vesicles, viruses, proteins, ribosomes,


polysomes Glycerol Mammalian cells (infrequent), proteins Sorbitol Nonmammalian
subcellular particles.

2.2.3 Polysaccharides

These include: Ficoll, polysucrose and dextrans Mammalian cells (sometimes in combination
with iodinated density gradient media), mammalian subcellular particles (infrequent).
(Henrickson, 2024)

2.2.4 Inorganic Salts (Ionic Metal Salts)

Ionic gradient media, comprised of concentrated heavy metal salts, are almost exclusively used
for isopycnic separations of nucleic acids.6 Cesium chloride and cesium sulfate are the most
widely used heavy metal salts with gradient densities of up to 1.91 g/cm3. Other useful salts
include sodium iodide, sodium bromide and the rubidium salts. (Suwanvecho et al., 2024) The
steepness and shape of the ionic density gradient formed depends on the centrifugal force and
type of rotor respectively. Ionic gradient media are highly ionic and non-viscous with high
osmolarities. It should be kept in mind that the density of the sample is highly dependent on
the sample's hydration, which in turn depends on the dehydration power of the ionic gradient
media. Examples are: CsCl, DNA, viruses, proteins Cs2SO4 DNA, RNA, KBr and Plasma
lipoproteins. (Henrickson, 2024)

2.2.5. Nonionic Iodinated Density Gradient Media

The iodinated aromatic compounds, originally devised for X-ray contrast applications, solve
the more serious deficiencies of the other classes of gradient media. gradient media have much
lower osmolarities and viscosities than sucrose at any concentration. Polysaccharides such as
Ficoll are even more viscous than sucrose at all densities. (Henrickson 2024) Ionic gradient
media, such as cesium chloride, have higher densities and lower viscosities than other density
gradient media. However, their use is restricted due to the high osmolarities and ionic strength
which affect the hydration of osmotically sensitive particles and can disrupt or otherwise

15
modify the integrity of biological particles. For example, diatrizoate mainly is used as a
component of commercial lymphocyte isolation media. Nycodenz, Histodenz Mammalian
cells, organelles, membrane vesicles, viruses Iodixanol Mammalian cells, organelles,
membrane vesicles, viruses, plasma lipoproteins, proteins, DNA Colloidal silica media Percoll
Mammalian cells, organelles, membrane vesicles (infrequent). (Suwanvecho et al., 2024)

16
CHAPTER THREE
3.0 Types of Centrifuge Machines Used in Biochemistry

Centrifugation is a fundamental technique in biochemistry used for separating particles in a


mixture based on size, shape, and density under the influence of centrifugal force (Wilson
and Walker, 2018).

• Low-Speed Centrifuge
Low-speed centrifuges operate at relatively low rotational speeds and are mainly used for
separating large biological particles.

Uses in Biochemistry:

I. Separation of whole cells from culture media

II. Sedimentation of nuclei and cell debris

III. Routine biochemical and clinical sample preparation


Low-speed centrifugation is commonly applied in the initial stages of cell fractionation
(Nelson and Cox, 2021). Horizontal

• High-Speed Centrifuge
High-speed centrifuges generate higher centrifugal force and are suitable for smaller cellular
components.

Uses in biochemistry:

I. Isolation of mitochondria, lysosomes, and peroxisomes


II. Enzyme extraction

III. Clarification of complex biological samples

These centrifuges play an important role in subcellular fractionation techniques (Scopes,


2017).

• Ultracentrifuge
Ultracentrifuges operate at extremely high speeds and are essential for macromolecular
studies.

Types:

I. Preparative ultracentrifuge: for purification and isolation

II. Analytical ultracentrifuge: for studying molecular mass and interactions

Uses in biochemistry:

I. Separation of ribosomes, viruses, and lipoproteins


II. Analysis of proteins and nucleic acids

17
Ultracentrifugation is crucial for understanding biomolecular structure and behavior
(Svedberg and Pedersen, 2019).

• Refrigerated Centrifuge
Refrigerated centrifuges maintain low temperatures during operation.

Uses in biochemistry:

I. Protection of heat-sensitive enzymes and proteins


II. Prevention of protein denaturation

III. Blood plasma and serum separation

Temperature control is essential when working with labile biomolecules (Wilson and Walker,
2018).

• Microcentrifuge
Microcentrifuges are designed for very small sample volumes, typically in microcentrifuge
tubes.

Uses in biochemistry:

I. DNA and RNA extraction

II. PCR sample preparation

III. Rapid protein precipitation

They are widely used in molecular biology and biochemical laboratories (Brown, 2020).

• Density Gradient Centrifuge


Density gradient centrifugation separates particles based on buoyant density using media
such as sucrose or cesium chloride.

Uses in biochemistry:

I. Separation of organelles
II. Purification of DNA, RNA, and viruses

III. Lipoprotein fractionation

This method provides high resolution and purity in biochemical separations (Nelson and Cox,
2021).

18
• Continuous-Flow Centrifuge
Continuous-flow centrifuges allow samples to be processed continuously rather than in
batches.

Uses in biochemistry:

I. Large-scale harvesting of cells

II. Industrial enzyme and protein production


III. Bioprocessing applications

They are especially important in large-volume biochemical and biotechnological operations


(Scopes, 2017).

19
Figure 5: Low-Speed Centrifuge

Source: Principles and techniques of biochemistry and molecular biology (8th ed.).
Cambridge University Press (2021).

20
Figure 6: High-Speed Centrifuge

Sources: Principles and techniques of biochemistry and molecular biology (8th ed.).
Cambridge University Press (2018)

21
Figure 7: Ultracentrifuge
Source: The ultracentrifuge. Oxford University Press (2021).

22
Figure 8: Refrigerated Centrifuge

Sources: Principles and techniques of biochemistry and molecular biology (8th ed.).
Cambridge University Press (2018).

23
Figure 9: Microcentrifuge

Sources: Protein purification: Principles and practice (4th ed.). Springer (2020).

24
Figure 10: Density Gradient Centrifuge
Sources: Lehninger principles of biochemistry (8th ed.). W. H. Freeman and Company
(2021).

25
Figure 11: Continuous-Flow Centrifuge

Sources: Gene cloning and DNA analysis: An introduction (8th ed.). Wiley-Blackwell (2018).

26
CHAPTER FOUR

4.0 Application of Centrifugation in Biochemistry

• Cell and organelle fractionation

Differential centrifugation enables isolation of nuclei, mitochondria, lysosomes, and

microsomes for downstream biochemical assays (enzyme activity, western blotting, metabolite

analysis). This is foundational for studies of cellular compartmentation and organelle-specific

biochemistry. (Du et al., 2022)

• Protein purification and sample clarification

Centrifugation removes insoluble debris after cell lysis, concentrates proteins, and assists in

early purification steps (e.g., pelleting inclusion bodies, separating soluble and insoluble

fractions prior to chromatography). For large-scale protein workflows, preparative

centrifugation accelerates processing of lysates and precipitates. (Hirohata et al., 2024)

• Nucleic acid preparation

Spin columns and centrifugal precipitation are standard for plasmid and genomic DNA

purification, RNA extraction workflows, and for concentrating nucleic acids prior to

sequencing or PCR. (Hirohata et al., 2024)

• Extracellular vesicle (EV) isolation and characterization

Differential and density-gradient ultracentrifugation are widely used to isolate EV populations

(exosomes, microvesicles). Protocols typically combine sequential centrifugation steps to

remove cells/debris, then ultracentrifugation to pellet EVs — though alternatives (size-

exclusion, affinity capture) are increasingly employed to improve purity. (Suwanvecho et al.,

2024)

27
• Clinical and diagnostic uses

Centrifuges are used in routine clinical labs for blood fractionation (serum, plasma), urine

sedimentation, hematocrit measurement, and for sample prep in biochemical assays. Their

reliability and throughput make them central to diagnostic workflows. (Schuck et al., 2013)

• Vaccine and virus purification, lipoprotein research

Density gradients and ultracentrifugation are used to purify viral particles and study lipoprotein

density classes (HDL, LDL), supporting virology, vaccine development and cardiovascular

biochemistry. (Henrickson, 2024)

4.1 Practical Considerations, Limitations and Troubleshooting

• Sample damage and aggregation: Excessive g or prolonged runs can cause

aggregation or structural changes to macromolecules; temperature control and

optimized rotor selection mitigate these risks. (Labotec, 2024)

• Purity vs yield trade-off: Differential centrifugation is fast but provides crude

fractions; density gradients provide higher purity at the cost of time and material loss.

Combine with chromatography or affinity methods when high purity is required.

(Schuick, 2013)

• Standardization and reproducibility: small differences in rotor type, tube geometry,

or gradient media affect outcomes; thus, standardized protocols and reporting (exact g,

rotor, times) are essential for reproducibility. Recent methodological papers stress

protocol transparency. (Suwanvecho et al., 2024)

• Limitations for very small particles: Isolation of small EV subpopulations or protein

complexes sometimes requires orthogonal techniques (e.g., SEC, immunocapture, mass

spectrometry, single-particle analysis) since centrifugation alone may not resolve

overlapping density/size ranges. (Du et al., 2022)

28
CHAPTER FIVE

5.0 Summary

Centrifugation is a fundamental technique in biochemistry used to separate components of a

mixture based on differences in size, shape, and density by applying centrifugal force. When a

sample is spun at high speed in a centrifuge, denser at the bottom of the tube as pellet, while

lighter components remain in the supernatant. This review focuses on the basics and principle

of centrifugation, classes of centrifuges, types of centrifuge separations, different types of

density gradient media, classification of industrial centrifuges, types of centrifuges and

applications of centrifugation in biochemistry. Centrifugation, clearly, plays an important role

in the pharmaceutical industry in the production of bulk drugs, biological products,

determination of molecular weight of colloids and in the evaluation of suspensions and

emulsions.

5.1 Conclusion

Centrifugation remains a cornerstone technique in biochemistry: indispensable for

fractionation, purification, and characterization of biological materials. Continued instrument

and protocol development (notably in analytical ultracentrifugation and automated sample

prep) are expanding its precision and applicability, but careful method selection and rigorous

reporting are required to balance yield, purity and structural integrity of biological samples.

Centrifugation is one of the most important and widely applied research techniques in

biochemistry, cellular and molecular biology and in evaluation of suspensions and emulsions

in pharmacy and medicine. It plays crucial role in studying cell structure, enzyme activity,

molecular interactions, and disease diagnosis.

29
REFERENCES
Brown, T. A. (2020). Gene cloning and DNA analysis: An introduction (8th ed.). Wiley-
Blackwell.

Nelson, D. L., & Cox, M. M. (2021). Lehninger principles of biochemistry (8th ed.). W. H.
Freeman and Company.

Scopes, R. K. (2017). Protein purification: Principles and practice (4th ed.). Springer.

Svedberg, T., & Pedersen, K. O. (2019). The ultracentrifuge. Oxford University Press.

Wilson, K., & Walker, J. (2018). Principles and techniques of biochemistry and molecular
biology (8th ed.). Cambridge University Press.

D. Rickwood and J. M. Graham (2017); Biological Centrifugation, Springer Verlag; ISBN:


0387915761.

D. Rickwood, T. Ford, J. Steensgaard (2019): John Wiley & Son Ltd. ISBN: 0471942715.

T. C. Ford and J. M. Graham (2020): An Introduction to Centrifugation, BIOS Scientific


Publishers, Ltd. ISBN 1 872748 40 6.

D. Rickwood (2012): Centrifugation: A Practical Approach ASIN: 090414755X.

D. Rickwood and J. M. Graham (2017): Subcellular Fractionation: A Practical Approach,


Oxford University Press. ISBN: 0199634947.

Suwanvecho, C., Smith, J., Lee, A., (2024). Centrifugal-assisted sample preparation
techniques. Journal / Article summary.

Hirohata, K., & Patel, R., (2024). Applications and Limitations of Equilibrium Density
Gradient AUC. Analytical Chemistry.

Current Protocols (Henrickson / methods authors). (2024). Methods for the design and analysis
of analytical ultracentrifugation. Current Protocols in Molecular Biology.

Du, M., & Smith, J., (2022). Progress, applications, challenges and prospects of protein …
(Review on protein techniques and centrifugation use).

Schuck, P. (2013). Analytical ultracentrifugation as a tool for studying proteins. Nature


Protocols / Review.

Labotec. (2024). How Are Centrifuges Used in Clinical Research? (industry/clinical overview).

30
Brown, T. A. (2020). Gene cloning and DNA analysis: An introduction (8th ed.). Wiley-
Blackwell.

Nelson, D. L., & Cox, M. M. (2021). Lehninger principles of biochemistry (8th ed.). W. H.
Freeman and Company.

Scopes, R. K. (2017). Protein purification: Principles and practice (4th ed.). Springer.

Svedberg, T., & Pedersen, K. O. (2019). The ultracentrifuge. Oxford University Press.

Wilson, K., & Walker, J. (2018). Principles and techniques of biochemistry and molecular
biology (8th ed.). Cambridge University Press.

31

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