Fisher’s test: Mutually exhaustive - it means that all possible
outcomes are accounted for– with no categories
Fisher's Exact Test
missing.
- is a statistical significance test used to
First step in calculating fisher’s test
determine if there is a significant association
- Set up 2x2 contingency table
between two categorical variables in a 2x2
contingency table.
What is the purpose of calculating expected cell
- It is named after the statistician Ronald
count in fisher’s exact value?
Fisher, who developed the test in 1925.
- To determine the expected counts under the
Why is fisher’s exact test considered exact? null hypothesis of no association
- It calculates the exact probability of In fisher’s test, we have:
observing the given relationship between
the two variables. Null Hypothesis = No association
Alternative Hypothesis = There is a statistically
Fisher’s exact test, how is it useful?
significant association between two variables.
- It is useful when we are dealing with small
sizes or when the expected cell counts are The test statistic for fisher’s test is
small. - Hypergeometric distribution formula
Cases that used Fisher’s exact test (examples) 1. The p-value represents the probability of
observing the given relationship if the null
→ Medical and epidemiological studies
hypothesis is true.
→ Contingency table analysis 2. It is important to conclude practical
significance to statistical significance
→ Genetic and genomic research
because a statistically significant result may
not always be practical or clinical
→ quality control and process improvements.
significance.
Key assumptions for Fisher’s test: 3. If the p value is 0.02 then we say there is a
statistically significant association
➢ Categorical values
between two variables.
➢ Independent variable
➢ Small expected counts
➢ Random sampling
➢ Mutually exclusive and exhaustive
Mutually exclusive - a person can only vary in one
category.