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54 followers · 13 following

Sponsoring

@hoppscotch

Achievements

Achievement: Galaxy BrainAchievement: Public SponsorAchievement: Pull Sharkx3Achievement: StarstruckAchievement: Pair Extraordinairex3Achievement: QuickdrawAchievement: YOLO

Achievements

Achievement: Galaxy BrainAchievement: Public SponsorAchievement: Pull Sharkx3Achievement: StarstruckAchievement: Pair Extraordinairex3Achievement: QuickdrawAchievement: YOLO

Highlights

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Ekin-Kahraman/README.md

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  1. rustscenic rustscenic Public

    The simplest, fastest software for studying gene regulation in single-cell data. Core SCENIC and SCENIC+ rewritten in Rust, with a Python API. Built and scaled with the Huang Lab at Mount Sinai.

    Python 23 57

  2. covid-airway-deconvolution covid-airway-deconvolution Public

    Airway cell composition in COVID-19 Β· Python & PyTorch

    Python

  3. safetynett safetynett Public

    NHS GP follow-up automation: OpenMail check-ins, contextual Claude assessment and GP review alerts. Designed to reduce the follow-up admin backlog. Hackathon finalist.

    TypeScript 1 1

  4. bulk-rnaseq-differential-expression bulk-rnaseq-differential-expression Public

    COVID-19 host response Β· R & DESeq2

    R 1

  5. single-cell-rnaseq-immune-profiling single-cell-rnaseq-immune-profiling Public

    Single-cell immune profiling Β· Python & Scanpy

    Python

  6. rnaseq-nextflow-pipeline rnaseq-nextflow-pipeline Public

    RNA-seq Nextflow pipeline

    Python