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Run a calculation on a Cloud TPU VM using JAX

This document provides a brief introduction to working with JAX and Cloud TPU.

Before you begin

Before running the commands in this document, you must create a Google Cloud account, install the Google Cloud CLI, and configure the gcloud command. For more information, see Set up the Cloud TPU environment.

Required roles

To get the permissions that you need to create a TPU and connect to it using SSH, ask your administrator to grant you the following IAM roles on your project:

For more information about granting roles, see Manage access to projects, folders, and organizations.

You might also be able to get the required permissions through custom roles or other predefined roles.

Create a Cloud TPU VM using gcloud

  1. Define some environment variables to make commands easier to use.

    export PROJECT_ID=your-project-id
export TPU_NAME=your-tpu-name
export ZONE=us-east5-a
export ACCELERATOR_TYPE=v5litepod-8
export RUNTIME_VERSION=v2-alpha-tpuv5-lite

    Environment variable descriptions

  2. Create your TPU VM by running the following command from a Cloud Shell or your computer terminal where the Google Cloud CLI is installed.

    $ gcloud compute tpus tpu-vm create $TPU_NAME \
    --project=$PROJECT_ID \
    --zone=$ZONE \
    --accelerator-type=$ACCELERATOR_TYPE \
    --version=$RUNTIME_VERSION

Connect to your Cloud TPU VM

Connect to your TPU VM over SSH by using the following command:

$ gcloud compute tpus tpu-vm ssh $TPU_NAME \
    --project=$PROJECT_ID \
    --zone=$ZONE

If you fail to connect to a TPU VM using SSH, it might be because the TPU VM doesn't have an external IP address. To access a TPU VM without an external IP address, follow the instructions in Connect to a TPU VM without a public IP address.

Install JAX on your Cloud TPU VM

(vm)$ pip install jax[tpu] -f https://storage.googleapis.com/jax-releases/libtpu_releases.html

System check

Verify that JAX can access the TPU and can run basic operations:

  1. Start the Python 3 interpreter:

    (vm)$ python3
     
    >>> import jax

  2. Display the number of TPU cores available:

    >>> jax.device_count()

The number of TPU cores is displayed. The number of cores displayed is dependent on the TPU version you are using. For more information, see TPU versions.

Perform a calculation

>>> jax.numpy.add(1, 1)

The result of the numpy add is displayed:

Output from the command: 

Array(2, dtype=int32, weak_type=True)

Exit the Python interpreter

>>> exit()

Running JAX code on a TPU VM

You can now run any JAX code you want. The Flax examples are a great place to start with running standard ML models in JAX. For example, to train a basic MNIST convolutional network:

  1. Install Flax examples dependencies:

    (vm)$ pip install --upgrade clu
(vm)$ pip install tensorflow
(vm)$ pip install tensorflow_datasets
(vm)$ pip install tensorboard

  2. Install Flax:

    (vm)$ git clone https://github.com/google/flax.git
(vm)$ pip install --user flax

  3. Run the Flax MNIST training script:

    (vm)$ cd flax/examples/mnist
(vm)$ python3 main.py --workdir=/tmp/mnist \
    --config=configs/default.py \
    --config.learning_rate=0.05 \
    --config.num_epochs=5

The script downloads the dataset and starts training. The script output should look like this:

I0214 18:00:50.660087 140369022753856 train.py:146] epoch:  1, train_loss: 0.2421, train_accuracy: 92.97, test_loss: 0.0615, test_accuracy: 97.88
I0214 18:00:52.015867 140369022753856 train.py:146] epoch:  2, train_loss: 0.0594, train_accuracy: 98.16, test_loss: 0.0412, test_accuracy: 98.72
I0214 18:00:53.377511 140369022753856 train.py:146] epoch:  3, train_loss: 0.0418, train_accuracy: 98.72, test_loss: 0.0296, test_accuracy: 99.04
I0214 18:00:54.727168 140369022753856 train.py:146] epoch:  4, train_loss: 0.0305, train_accuracy: 99.06, test_loss: 0.0257, test_accuracy: 99.15
I0214 18:00:56.082807 140369022753856 train.py:146] epoch:  5, train_loss: 0.0252, train_accuracy: 99.20, test_loss: 0.0263, test_accuracy: 99.18

Clean up

To avoid incurring charges to your Google Cloud account for the resources used on this page, follow these steps.

When you are done with your TPU VM, follow these steps to clean up your resources.

  1. Disconnect from the Cloud TPU instance, if you have not already done so:

    (vm)$ exit

    Your prompt should now be username@projectname, showing you are in the Cloud Shell.

  2. Delete your Cloud TPU:

    $ gcloud compute tpus tpu-vm delete $TPU_NAME \
    --project=$PROJECT_ID \
    --zone=$ZONE

  3. Verify the resources have been deleted by running the following command. Make sure your TPU is no longer listed. The deletion might take several minutes.

    $ gcloud compute tpus tpu-vm list \
    --zone=$ZONE

Performance notes

Here are a few important details that are particularly relevant to using TPUs in JAX.

Padding

One of the most common causes for slow performance on TPUs is introducing inadvertent padding:

bfloat16 dtype

By default, matrix multiplication in JAX on TPUs uses bfloat16 with float32 accumulation. This can be controlled with the precision argument on relevant jax.numpy function calls (matmul, dot, einsum, etc). In particular:

JAX also adds the bfloat16 dtype, which you can use to explicitly cast arrays to bfloat16. For example, jax.numpy.array(x, dtype=jax.numpy.bfloat16).

What's next

For more information about Cloud TPU, see: